Transcript Information: S_Transcript_100906.p1


Annotated TAIR IDAT2G01390.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:172256-174137 | Forward length=577
E-Value3.7E-181
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8088738868826
Replicate 28.0735671736606
Replicate 37.5263779632906
Condition 2: 8 Hour
Replicate 18.4150781352599
Replicate 28.3375692232371
Replicate 38.3753667655323
Condition 3: 24 Hour
Replicate 17.2202313054915
Replicate 26.3061195785789
Replicate 38.2513939537817


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100906.p1 GENE.S_Transcript_100906~~S_Transcript_100906.p1 ORF type:complete len:593 (+),score=89.71,PPR_2|PF13041.2|2.4e+03,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|6.4e-11,PPR_2|PF13041.2|5.3e-09,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|6.8e+02,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.7e-09,PPR|PF01535.16|0.0002,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.0048,PPR|PF01535.16|0.00035,PPR|PF01535.16|62,PPR|PF01535.16|95,PPR|PF01535.16|1,PPR|PF01535.16|5.1,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.1,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|2e+02,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|5.5e-05,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|0.99,PPR_1|PF12854.3|3.4,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|85,TPR_14|PF13428.2|7.8e+02,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|58,TPR_14|PF13428.2|38 S_Transcript_100906:888-2666(+)
ATGTCCCTATGGTTGGCAACTAGAAGAATTTTCAGAATTTTACCGGGTTTCAAGCATATTTATGATTATTATTGGCATTGTGCAAGCTCAAAAAAATACACTAGATATGTGTATTCTGTTTCTCAACAGGGTTATAGAAACTTCTCTCAATCCACCCTTAAAGAGGGAAGCAGAAGGGTGAAACATTTATCTAAGAAAAATGTAGACCCAAAAGTATACATGAGAGAGATTGTTAGAGAAATATCAAATATATTGAGGTACTCTTCATGGGATTCCGCACGAGAACAGCTGGAGAGGGTACATGTGAAATGGGACTCCTATACTGTCAATCAAGTTTTGAAAACCCACCCCCCAGTGGAAAAGGCCTGGTTGTTTTTCAATTGGGTTTCCAAGCTGAAGGGCTTTAAGCATGACCAATTTACTTATACAACCATGTTGAGTATCTTTGGAGAGGCACGAAGAGTAGATTCTATGAAGTTTGTCTTTCACCAGATGCAAGAGAATGGGATAAAGATTAATGCTGTTACTTACACTGTGCTTCTCCATTGGCTTTCAAATAATGGTGACTTTCATGGGGCAGTGAAGGTATGGGAGAAGATGAAAGCTAAGTGCTGTCATCCAACTGTTGTTTCTTATACGGCCTACATGAAGATTTTATTTGATAATGACAGAGCTCAGGAGGCCGTCGATATCTACAAAGAAATGTTGCAATCTGGAATGTCGCCTACTTGTCATACTTATACAATCTTAATGGAGCATCTTATCCGTTCTGGCAAATGCACATCAGCTCTTGAAGTTTTTGAAAAAATGCAAGAGACTGGGGTACAAGCTGACAAGGCAACATGCAATATTCTGGTAGAGCAATTTAGCAACGCAGGGGAGGCGTGTGGAATTATCCAAATTCTTCAGTACATGAAGGAACATTCCCTTGTTCTTCGTTACCCTGTTTTTGTTAAGGCACATAAAACGCTGAAAATGGCTGGTGAGAATGATGCACTTCTTCGACAAGTTAATCCACATATCCGGTTTGAAGGCCCCAATGAGAGTGAGGTTGTGGAGTTTGATGAGTCTGCTTCTCTAGATAACAATACCACAGACAGGGGACTCATAATAGAATTTCTAAGGAAGAAAAATTTTGTTGCCATTGATCATTTACTTGATGGGATGGCAGACCAGAATGTTTCACTAGATTCTGAGATTGTCTCAAATATTATTGAGGCAAATTGTGCTCATGGCAGGATGGATGCTGCTCTGCTGGCCTTACGTTATAGTATTGATCAGGGTATTCACATTGAACAAGTAGCCTATCTTTCTCTACTGGGGGTCCTGATGAGAGCAAACGAGTTTTCAAAGATCTTGCAGATAGTAGAGCAAATGGTTAAGATTGGATTGTATCTCGAATCACAATTGGCTTCCGCTTTGATTTATAGGCTTGGCCAAGCCAGAGATCTTGGCAAGGCTATAAAATTATTTAACTTATTGCTTGAGGAGGCAAAAAGCACCACTGTATACACTGCTCTAATTGATGCTTGTTTTGCATCTGGAGATCCAGATAAGGCAATTGTAAAATTCAATGGCATGAAAAACAGGGGGATTCATATTGCTTCAGGAACATACAATGTGCTCTTAAGAGGTCTTGAAGTATGTGGCAGAGTTGATGAAGCAGAATTCTACAGGAAGGAAAAGAAATGTTTCCAGAGGGAATGGCATGTGTCACAGACTATTTTAATTGAGGAAAAGACCTGTGATCTCTTATTCGCAGGGTACATGGTATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100906.p1 GENE.S_Transcript_100906~~S_Transcript_100906.p1 ORF type:complete len:593 (+),score=89.71,PPR_2|PF13041.2|2.4e+03,PPR_2|PF13041.2|0.023,PPR_2|PF13041.2|6.4e-11,PPR_2|PF13041.2|5.3e-09,PPR_2|PF13041.2|2e-11,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|1.5e+04,PPR_2|PF13041.2|6.8e+02,PPR_2|PF13041.2|3.4,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|7.7e-09,PPR|PF01535.16|0.0002,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.0048,PPR|PF01535.16|0.00035,PPR|PF01535.16|62,PPR|PF01535.16|95,PPR|PF01535.16|1,PPR|PF01535.16|5.1,PPR|PF01535.16|0.00013,PPR|PF01535.16|0.1,PPR_3|PF13812.2|0.0059,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|2e+02,PPR_1|PF12854.3|0.36,PPR_1|PF12854.3|5.5e-05,PPR_1|PF12854.3|1.7,PPR_1|PF12854.3|0.0034,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|2.8e+02,PPR_1|PF12854.3|0.99,PPR_1|PF12854.3|3.4,TPR_14|PF13428.2|2.4e+03,TPR_14|PF13428.2|2.1e+02,TPR_14|PF13428.2|85,TPR_14|PF13428.2|7.8e+02,TPR_14|PF13428.2|2.7e+02,TPR_14|PF13428.2|58,TPR_14|PF13428.2|38 S_Transcript_100906:888-2666(+)
MSLWLATRRIFRILPGFKHIYDYYWHCASSKKYTRYVYSVSQQGYRNFSQSTLKEGSRRVKHLSKKNVDPKVYMREIVREISNILRYSSWDSAREQLERVHVKWDSYTVNQVLKTHPPVEKAWLFFNWVSKLKGFKHDQFTYTTMLSIFGEARRVDSMKFVFHQMQENGIKINAVTYTVLLHWLSNNGDFHGAVKVWEKMKAKCCHPTVVSYTAYMKILFDNDRAQEAVDIYKEMLQSGMSPTCHTYTILMEHLIRSGKCTSALEVFEKMQETGVQADKATCNILVEQFSNAGEACGIIQILQYMKEHSLVLRYPVFVKAHKTLKMAGENDALLRQVNPHIRFEGPNESEVVEFDESASLDNNTTDRGLIIEFLRKKNFVAIDHLLDGMADQNVSLDSEIVSNIIEANCAHGRMDAALLALRYSIDQGIHIEQVAYLSLLGVLMRANEFSKILQIVEQMVKIGLYLESQLASALIYRLGQARDLGKAIKLFNLLLEEAKSTTVYTALIDACFASGDPDKAIVKFNGMKNRGIHIASGTYNVLLRGLEVCGRVDEAEFYRKEKKCFQREWHVSQTILIEEKTCDLLFAGYMVS*

Click here to download the sequence:
Link to NCBI Protein BLAST