Transcript Information: S_Transcript_100942.p1


Annotated TAIR IDAT5G08270.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23200.1); Has 89 Blast hits to 86 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2661747-2663482 | Forward length=386
E-Value8.1E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0285217868669
Replicate 22.7711716352434
Replicate 31.9600975547788
Condition 2: 8 Hour
Replicate 12.3694878130148
Replicate 23.4584500312621
Replicate 31.6476017472449
Condition 3: 24 Hour
Replicate 11.5829625717822
Replicate 21.2043571369074
Replicate 32.5587581280553


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100942.p1 GENE.S_Transcript_100942~~S_Transcript_100942.p1 ORF type:5prime_partial len:207 (+),score=37.33 S_Transcript_100942:2-622(+)
CCCAAACACGCAAGACAGGAGTTCACCTGGGGTTCAAACTTCAAGGGATGCAAACGTCAAAACCCTGAGAGATTTTCTTGTCTTCTCCATGTAAAACCCCAAACCCGGTTCGCAATCTCAGTTCTGGGATTCAAACTCGAAGCCATAGCTTCTGCACCAGAGCTACTTTCTTTCACTTCAAATGGCGCTTCTCTTCAACAAATTTCAAGATTTGTGAGAACTCTTGCCAGAAGTCCCACATTTGCTAAGGATCCTAGGCACATGCAGTTCGAAGCGGATATTAATCGCCTCTTTCTTTACACAAGCTATAATCGTTTGGGAAAAGACGCTGATGAGGCAGATGTAGAGGAGATAATTGATATGGCTAGCAAAGCTTCCTTGGATGACCAGCAGAAGCAAGTTCAAGAGAATCTTCATTTTCAGATTAAGTCCTTCTGCACGCTTATGGATGAAATTCTTCTTCCAGTGAAGCACTTAGAAGAACCGCTTCGATCAGAGGTAGAGATTACTAACCATCGAAGAAGTGGGCTAAGTCTTGCTATTGGCAATGCTGGAAGCTCTGCCAGTAACCACTCTGTGCAGGTGTTCCTGAAACAAAATTACTCAAGCTTGCTGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100942.p1 GENE.S_Transcript_100942~~S_Transcript_100942.p1 ORF type:5prime_partial len:207 (+),score=37.33 S_Transcript_100942:2-622(+)
PKHARQEFTWGSNFKGCKRQNPERFSCLLHVKPQTRFAISVLGFKLEAIASAPELLSFTSNGASLQQISRFVRTLARSPTFAKDPRHMQFEADINRLFLYTSYNRLGKDADEADVEEIIDMASKASLDDQQKQVQENLHFQIKSFCTLMDEILLPVKHLEEPLRSEVEITNHRRSGLSLAIGNAGSSASNHSVQVFLKQNYSSLLM*

Click here to download the sequence:
Link to NCBI Protein BLAST