Transcript Information: S_Transcript_100944.p2


Annotated TAIR IDAT5G08270.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23200.1); Has 89 Blast hits to 86 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2661747-2663482 | Forward length=386
E-Value9.6E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.72416329891648
Replicate 20
Replicate 31.0036863174749
Condition 2: 8 Hour
Replicate 11.5957775067242
Replicate 20
Replicate 31.1600461281623
Condition 3: 24 Hour
Replicate 10.44581394878764
Replicate 22.6209850122306
Replicate 30.17157853336814


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100944.p2 GENE.S_Transcript_100944~~S_Transcript_100944.p2 ORF type:complete len:147 (+),score=32.25 S_Transcript_100944:183-623(+)
ATGGCGCTTCTCTTCAACAAATTTCAAGAGTTTGTGAGAACTCTTGCCAGAAGTCCCACATTTGCTAAGGATCCTAGGCACATGCAGTTCGAAGCGGATATTAATCGCCTCTTTCTTTACACAAGCTATAATCGTTTGGGAAAAGACGCTGATGAGGCAGATGTAGAGGAGATAATTGATATGGCTAGCAAAGCTTCCTTGGATGACCAGCAGAAGCAAGTTCAAGAGAATCTTCATTTTCAGATTAAGTCCTTCTGCACGCTTATGGATGAAATTCTTCTTCCAGTGAAGCACTTAGAAGAACCGCTTCGATCAGAGGTAGAGATTACTAACCATCGAAGAAGTGGGCTAAGTCTTGCTATTGGCAATGCTGGAAGCTCTGCCAGTAACCACTCTGTGCAGGTGTTCCTGAAACAAAATTACTCAAGCTTGCTGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100944.p2 GENE.S_Transcript_100944~~S_Transcript_100944.p2 ORF type:complete len:147 (+),score=32.25 S_Transcript_100944:183-623(+)
MALLFNKFQEFVRTLARSPTFAKDPRHMQFEADINRLFLYTSYNRLGKDADEADVEEIIDMASKASLDDQQKQVQENLHFQIKSFCTLMDEILLPVKHLEEPLRSEVEITNHRRSGLSLAIGNAGSSASNHSVQVFLKQNYSSLLM*

Click here to download the sequence:
Link to NCBI Protein BLAST