Transcript Information: S_Transcript_100973.p1


Annotated TAIR IDAT5G11600.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3733815-3735015 | Reverse length=242
E-Value2.6E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7042808672776
Replicate 23.151827079645
Replicate 31.3627637500198
Condition 2: 8 Hour
Replicate 11.3656653897671
Replicate 22.0939168677577
Replicate 30.94503757854597
Condition 3: 24 Hour
Replicate 12.4750360605107
Replicate 22.6794654080411
Replicate 31.9879443866101


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_100973.p1 GENE.S_Transcript_100973~~S_Transcript_100973.p1 ORF type:5prime_partial len:203 (+),score=61.03 S_Transcript_100973:3-611(+)
TATATTCAATTTCCGAACCAAAAACAAGAAAGCGCAAAAACCCTTGGTTCGCCGTTTGAAACCTGTTATTGCAATCCCAATTCTCTCAATTGTTGGTCAGAAACAATGCCTCCAGAGAACCAAAAATCAGTGAAAAAGGAACAACAAGACTCGGAAGATGATGAGAAGCCAATTTCTCAGGTTCGAAATAAGAACAAGAAGAAGCCTTTAACTCCCACAAGTGGAGCTACAAAGCAACAATCTAAGGTTAAGAAAGAAGAATTGAATGATTCTGTGTCTCCTTTGAAGAAATCAAAACAAGCCAAACCCAAGAAAGAAGAGCCTGATTTTTGTGATGACAAGAAGCCCAATATCAAGGATGACAAGAAAAAGGCGAAGAAGGTTCAGGAAGAAGAGAAAGGAAAGGGTGATGGGAAGAAGAGAGAGAGAAAGGTGTATGATTTGCCTGGACAGAAACGTGACCCTCCTGAAGAGAGAGAACCATTAAGGATTTTCTATGAAAGTTTGTATGAGCAAAAGCCTGGCAGTGAATTGGCTGAAGTCTGGGTTCTTTTTGCGTTAACCAAGTTCAATCACTGGGCAGGGGTATTGAGGTTGCAACTAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_100973.p1 GENE.S_Transcript_100973~~S_Transcript_100973.p1 ORF type:5prime_partial len:203 (+),score=61.03 S_Transcript_100973:3-611(+)
YIQFPNQKQESAKTLGSPFETCYCNPNSLNCWSETMPPENQKSVKKEQQDSEDDEKPISQVRNKNKKKPLTPTSGATKQQSKVKKEELNDSVSPLKKSKQAKPKKEEPDFCDDKKPNIKDDKKKAKKVQEEEKGKGDGKKRERKVYDLPGQKRDPPEEREPLRIFYESLYEQKPGSELAEVWVLFALTKFNHWAGVLRLQLR*

Click here to download the sequence:
Link to NCBI Protein BLAST