Transcript Information: S_Transcript_10103.p1


Annotated TAIR IDAT5G08470.1
Annotated Gene Nameperoxisome 1
Annotated Gene Symbol(s)PEX1
Annotation TypeOrtholog
Chromosome Positionchr5:2735925-2742731 | Forward length=1130
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.084140448959
Replicate 212.69046998295
Replicate 312.927757835206
Condition 2: 8 Hour
Replicate 117.668001476464
Replicate 217.865996978779
Replicate 317.453873456673
Condition 3: 24 Hour
Replicate 116.023423774103
Replicate 214.630815916481
Replicate 313.620347638295


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10103.p1 GENE.S_Transcript_10103~~S_Transcript_10103.p1 ORF type:complete len:1137 (+),score=271.91,AAA|PF00004.25|2.2e-16,AAA|PF00004.25|1.3e-38,PEX-1N|PF09262.7|1.3e-23,AAA_16|PF13191.2|5.8e-05,AAA_16|PF13191.2|8.9e+02,AAA_16|PF13191.2|0.0045,AAA_16|PF13191.2|2.5e+02,AAA_16|PF13191.2|3.1e+02,AAA_25|PF13481.2|0.04,AAA_25|PF13481.2|21,AAA_25|PF13481.2|0.8,AAA_25|PF13481.2|81,AAA_17|PF13207.2|0.0061,AAA_17|PF13207.2|0.11,AAA_19|PF13245.2|0.0048,AAA_19|PF13245.2|0.083,RNA_helicase|PF00910.18|0.02,RNA_helicase|PF00910.18|1.5,RNA_helicase|PF00910.18|1.2e+02,AAA_22|PF13401.2|0.0014,AAA_22|PF13401.2|3,AAA_22|PF13401.2|4.1e+03,AAA_5|PF07728.10|0.036,AAA_5|PF07728.10|0.055,IstB_IS21|PF01695.13|0.1,IstB_IS21|PF01695.13|0.021,IstB_IS21|PF01695.13|8.8e+03,RuvB_N|PF05496.8|0.0062,RuvB_N|PF05496.8|0.69,RuvB_N|PF05496.8|3.2e+03,AAA_24|PF13479.2|0.019,AAA_24|PF13479.2|0.67,NACHT|PF05729.8|0.017,NACHT|PF05729.8|2.1e+03,NACHT|PF05729.8|28,NACHT|PF05729.8|2.2e+02 S_Transcript_10103:190-3600(+)
ATGGAGGTGGAGGTAAGAGCAGCAGCAGGAACAGAGAACTGCTTCGTATCGCTCCCATTCTCTCTCCTCCAAACCCTAGAATCCACTCATCCTGGTCATCGATTACCTCATCTTCTACCTCTCGAGCTCCGTTCTCTCTCTTCTCCTCATCTCCTTTGGCATGTCGCTTGGTCTGGCTCCGCCTCTTCTTCTTCCGCCATCGAGATTGCTCAAGAATTCGCTGCATGTATTGGGCTACCTGACCGTACAATTGTTCAAGTGCGACCTCTTCCTAATGTACCGAAGGCTAGCCTTGTCACAATTGAACCTCTCACCGAAGATGATTGGGAAGTTATTGAGCTCAATGCAGAGGTAGCTGAGGCAGCTATCTTGAGTCAGGTCCGTGTTGTCCATGGGAAGATGTCTTTCCCATTGTGGTTGCATGGCCACAGAATTGTTACCTTTTCTGTTGTTTCTATGGTGCCCAACAAAACAGTAGTGCAACTTGTTCCAGGAACAGAATTGGCTGTTGCACCAAAGAGACGTAAAAAATCTGCTGATCAGCTGCAAGACTCCCATTTGGAGCCTTCTAATGGAGCTAATTCTTTGCAAAAGGCTCTTTTACGTGTTCAAGATCCAAAGAACAGTTTGATTAAGGAAAGCCATATGAGGGATGGTGGTGTGGGCATTGAGCTCTCATCTGTTGTCTTGATCCACCCGGAAACAGCTAAGAGTTTTTTATTTGATTTGCTTCAAGTGGTTGTAATAGTGCCTAAGTTGCCTTCAAAGATGAAAGTAGATTATCAAAATGATATGGTAAGAAAAGATTTTAATTCTTCTGCAAAGGAGCATAATGGGAAGGTTTTGACTGATCAGAAGGATTCTTGCTATGTTGTAGTTCATCTCTTGTTTTCAGAGTCCGTTGCTAAAGGACATCTGATGCTTTGTCAATCACTTCGCAACTATTTGAGAGTAAGCTTTCACTCATGGCTTTATGTGCAAAGATATGCTGGTGATTTGAAGAAAGATTTTCCATCCTTTTCACTTTCTCCTTGCCAATTTGTTACAATCACTGAGGATCTTCAAAACAATGCCCGAGAGATGCTTGATGACAGCCTTAAGTCAGAAGACATGCAGTCACTTCCTCAGGTGCCTCAGTATATTGGTGCACCAGATAGGTCATCACAAGAGGAGCTTTTATCTACCCTTTCTGATGGATCCTTTGATAATATAGCAAAGGAAGTTGGTATTCCTTTGAATAGTAAGGAAAAACTAAAGGTCCTCTTTTATGCATGGCTAAAGGCTCAGTTTCACGCTATCACTTCCATAACTGGTGAAAATGTCACTTCGCTGGTGTTGGGTCCTACAACTTTCCTCCGCTTTAAATGGATTGTCAGTGATGTTGGATCTGATGGTGATGGACAACGGCAGACATTAAGAGCAGTTATTTTAGAGGATAAAAAAAGGATGGCTGGTCCAATAAATGAGATCTTATATGTGCTAAATGCAGCTGCTGAGTCTTTGCTTACTCAAAAGTATAATGCTTATGAGCTTAGGGCTGTAGGAGATGAGATGAATAGCATCCCTGATAATCTGAAGGTATTCTTTGGGAATCTGGGTCTTGGCAGTTTGATTTCCTACAACACTTGCAAAGAGCTTGTGTTCAAACAATTCTCCAGTTCAACATTCTCTTCTTTGAGTTGGATGAGTACTGCATTATCTGATGTCATTAACAGGCTAACATTGCTGTTATCTCCTGCATGTGGAACATGGTTTGGTAATTTCAACCTCCCGTGTCCTGGTCATGTTCTAATATATGGGCCTCCAGGTTCTGGGAAAACGTTATTAGCTTCAGCTGCAGCAAAGTCCCTTGAGGATAACAAAGATATCTTGGTCCACACTGTGTTTGTACCTTGCTCTGCGTTGGCGGTAGAAAAGGTCACTTCAGTGCGTCAAATACTCAGCGACTATGTCTCAGAGGCATTGTATTATGCCCCGTCTGTCATTGTATTTGATGATCTTGATAGTTTGATTGCTTCCTCTGCTGATTCAGAAGGATCTCAAATGTCTGCCTACATGGTTGCACTTATGGAATTTATCACTGGGATCATGGATGAATATGGGGAAAAGAGGAAGAAATCATGTGGCCTTGGTCCAATAGCATTTGTGGCTTGTGTTCGTACTCTTGATAGCATACCTCAGTCATTGAGAGCTTCAGGGAGATTTGACTTCCACATACAACTTCCAGCTCCATCTACCTCAGAACGTTTGGCTGTCTTGAGACACGAAATTCAGAAGCGCTCCTTAAGATGTTCAGATGATACCTTGATGGATGTAGCTTCTAAATGTGATGGATATGATGCATATGATCTGGCTATATTAGTTGATAGGAGTGTTCATGCTGCCATTAGCCGTTTTTTGCCTTCCTGTGAGTCTGTTGAAGGGGAAAAGCCGAGCTTAATTGCTGATGATTTCTCACAAGCTAGGCATGATTTCCTTCCAGTTTCAATGCGTGACATAACAAAATCAGCATCTGATGGTGGTCGTGTTGGTTGGGAAGATGTTGGTGGTTTACTTGATGTTCGAAATGCTATCAAAGAGATGATTGAACTACCTTCGAAGTTTCCAAATATTTTTGCAAAATCTCCTTTAAGGCTGCGATCAAATGTTCTATTGTATGGCCCTCCTGGCTGTGGGAAAACTCATATAGTTGGGGCTGCAGCGGCTGCTTCTTCACTCAGATTTATATCAATAAAAGGTCCTGAGCTGTTGAACAAGTATATTGGTGCATCTGAGCAAGCTGTTCGAGATGTATTCTCCAAGGCAGCAGCTGCTGCTCCATGTCTTCTCTTTTTCGACGAATTTGATTCTATTGCTCCTAAAAGAGGGCATGACAACACTGGAGTTACCGATCGCGTTGTTAATCAGTTCTTGACTGAATTAGATGGGGTTGAAGTCTTAACTGGTGTATTTGTTTTTGCAGCAACAAGTAGACCTGATTTACTTGATGCTGCTTTGTTACGACCTGGCCGACTAGACCGCCTGCTCTTTTGTGATTTTCCTGGCTTGCGTGATAGGCTGGAAATACTAAGAGTTCTTTCTATGAAGTTACCATTGGCAGATAACGTTGATTTGGATGCCATAGCGTACATGACCGATGGATTTAGTGGTGCTGATCTCCAAGCGCTTCTCTCAGATGCACAACTAGCTGCAGTTCAGGAGCTTCTTGATGCCAGATATGACAGCAAATCAGGGAAGTCACCCGTAATTACCGATGACTTATTGAAGTCTGTTGCATCAAAGGCCAAACCGTCGGTTTCTGAGTCCGAGAAGCAGAGGCTTTATTCCATTTATAATCAATTCTTGGACTCGAAAAGATCTGTTGCTGCACAGTCAAGGGATGTAAAAGGCAAGAGAGCAACGTTAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10103.p1 GENE.S_Transcript_10103~~S_Transcript_10103.p1 ORF type:complete len:1137 (+),score=271.91,AAA|PF00004.25|2.2e-16,AAA|PF00004.25|1.3e-38,PEX-1N|PF09262.7|1.3e-23,AAA_16|PF13191.2|5.8e-05,AAA_16|PF13191.2|8.9e+02,AAA_16|PF13191.2|0.0045,AAA_16|PF13191.2|2.5e+02,AAA_16|PF13191.2|3.1e+02,AAA_25|PF13481.2|0.04,AAA_25|PF13481.2|21,AAA_25|PF13481.2|0.8,AAA_25|PF13481.2|81,AAA_17|PF13207.2|0.0061,AAA_17|PF13207.2|0.11,AAA_19|PF13245.2|0.0048,AAA_19|PF13245.2|0.083,RNA_helicase|PF00910.18|0.02,RNA_helicase|PF00910.18|1.5,RNA_helicase|PF00910.18|1.2e+02,AAA_22|PF13401.2|0.0014,AAA_22|PF13401.2|3,AAA_22|PF13401.2|4.1e+03,AAA_5|PF07728.10|0.036,AAA_5|PF07728.10|0.055,IstB_IS21|PF01695.13|0.1,IstB_IS21|PF01695.13|0.021,IstB_IS21|PF01695.13|8.8e+03,RuvB_N|PF05496.8|0.0062,RuvB_N|PF05496.8|0.69,RuvB_N|PF05496.8|3.2e+03,AAA_24|PF13479.2|0.019,AAA_24|PF13479.2|0.67,NACHT|PF05729.8|0.017,NACHT|PF05729.8|2.1e+03,NACHT|PF05729.8|28,NACHT|PF05729.8|2.2e+02 S_Transcript_10103:190-3600(+)
MEVEVRAAAGTENCFVSLPFSLLQTLESTHPGHRLPHLLPLELRSLSSPHLLWHVAWSGSASSSSAIEIAQEFAACIGLPDRTIVQVRPLPNVPKASLVTIEPLTEDDWEVIELNAEVAEAAILSQVRVVHGKMSFPLWLHGHRIVTFSVVSMVPNKTVVQLVPGTELAVAPKRRKKSADQLQDSHLEPSNGANSLQKALLRVQDPKNSLIKESHMRDGGVGIELSSVVLIHPETAKSFLFDLLQVVVIVPKLPSKMKVDYQNDMVRKDFNSSAKEHNGKVLTDQKDSCYVVVHLLFSESVAKGHLMLCQSLRNYLRVSFHSWLYVQRYAGDLKKDFPSFSLSPCQFVTITEDLQNNAREMLDDSLKSEDMQSLPQVPQYIGAPDRSSQEELLSTLSDGSFDNIAKEVGIPLNSKEKLKVLFYAWLKAQFHAITSITGENVTSLVLGPTTFLRFKWIVSDVGSDGDGQRQTLRAVILEDKKRMAGPINEILYVLNAAAESLLTQKYNAYELRAVGDEMNSIPDNLKVFFGNLGLGSLISYNTCKELVFKQFSSSTFSSLSWMSTALSDVINRLTLLLSPACGTWFGNFNLPCPGHVLIYGPPGSGKTLLASAAAKSLEDNKDILVHTVFVPCSALAVEKVTSVRQILSDYVSEALYYAPSVIVFDDLDSLIASSADSEGSQMSAYMVALMEFITGIMDEYGEKRKKSCGLGPIAFVACVRTLDSIPQSLRASGRFDFHIQLPAPSTSERLAVLRHEIQKRSLRCSDDTLMDVASKCDGYDAYDLAILVDRSVHAAISRFLPSCESVEGEKPSLIADDFSQARHDFLPVSMRDITKSASDGGRVGWEDVGGLLDVRNAIKEMIELPSKFPNIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISIKGPELLNKYIGASEQAVRDVFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPGLRDRLEILRVLSMKLPLADNVDLDAIAYMTDGFSGADLQALLSDAQLAAVQELLDARYDSKSGKSPVITDDLLKSVASKAKPSVSESEKQRLYSIYNQFLDSKRSVAAQSRDVKGKRATLA*

Click here to download the sequence:
Link to NCBI Protein BLAST