Transcript Information: S_Transcript_101487.p1


Annotated TAIR IDAT1G29040.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP02058 (InterPro:IPR011719); Has 344 Blast hits to 344 proteins in 122 species: Archae - 2; Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10134120-10135180 | Forward length=198
E-Value1.9E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.979354769671
Replicate 210.487245260523
Replicate 39.1800166156039
Condition 2: 8 Hour
Replicate 113.675026077803
Replicate 211.737696371516
Replicate 313.955667041826
Condition 3: 24 Hour
Replicate 17.6408112657684
Replicate 26.6060437330161
Replicate 37.6910269934883


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101487.p1 GENE.S_Transcript_101487~~S_Transcript_101487.p1 ORF type:5prime_partial len:223 (+),score=54.51,Lin0512_fam|PF09585.6|3.8e-40 S_Transcript_101487:3-671(+)
GTATTCAATCAACCAGGAAAAACTCGCCAAAAATACCAAAGAATCTCATCAAAAATCCAAGTATCTAATGCTTCTGAACTGAATCAAACTGAGAGTCCCCTCAAAGAAATGACATCTAGTACTTGTTCAATTGGCCTCATCATAAACCCATCTCACAGTTCAGCTCCTTTTCTTCCTTCTCTAAACAATTTCTCTAAAACCCATCATTACAACAACAAGAACACTTTCCCTCGATTTTCACGCCCCACCATCAGAATCAGAGCTGTAATGGCTGCTGATCAGACCAGCACAAGTGGGGAAATGATGAAGCTTCTCTTTGTTGAGATGGGTGTCGGTTATGACCAACATGGGCAGGATGTAACAGCTGCTGCAATGAGGGCTTGTAGGGATGCTATTTCTTCTAATTCCATCCCTGCTTTCCGTAGAGGATCAATACCTGGTGTTTCATTTGAGCAGATGAAACTGCAGATCAAGCTTGGAGTTCCCCGATCTCTCCAACAGTCTTTGGACATTGAGAAGGTCAAATCTGTGTTCCCATATGGGAAAATCCTTGATGTTGAGGTGGTTGATGGTGGGCTCATATGCTCAAGTGGCGTTCATGTAGAAGACATGGGAGACAAAAATGATGACTGCTACATCGTAAATGCAGCTGTTTATGTTGGTTATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101487.p1 GENE.S_Transcript_101487~~S_Transcript_101487.p1 ORF type:5prime_partial len:223 (+),score=54.51,Lin0512_fam|PF09585.6|3.8e-40 S_Transcript_101487:3-671(+)
VFNQPGKTRQKYQRISSKIQVSNASELNQTESPLKEMTSSTCSIGLIINPSHSSAPFLPSLNNFSKTHHYNNKNTFPRFSRPTIRIRAVMAADQTSTSGEMMKLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLQIKLGVPRSLQQSLDIEKVKSVFPYGKILDVEVVDGGLICSSGVHVEDMGDKNDDCYIVNAAVYVGY*

Click here to download the sequence:
Link to NCBI Protein BLAST