Transcript Information: S_Transcript_101518.p1


Annotated TAIR IDAT1G55860.1
Annotated Gene Nameubiquitin-protein ligase 1
Annotated Gene Symbol(s)UPL1
Annotation TypeOrtholog
Chromosome Positionchr1:20879900-20895393 | Reverse length=3930
E-Value9.9E-215
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.942156524036
Replicate 212.658977614967
Replicate 312.849447271361
Condition 2: 8 Hour
Replicate 116.43103844107
Replicate 214.303313064743
Replicate 315.841285651789
Condition 3: 24 Hour
Replicate 111.698352907531
Replicate 210.774598946132
Replicate 311.026030341034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101518.p1 GENE.S_Transcript_101518~~S_Transcript_101518.p1 ORF type:internal len:366 (-),score=64.38,HECT|PF00632.21|7.7e-91 S_Transcript_101518:3-1097(-)
TTGTTAACCCTCCAGCATCAATACCTTCTTCACCTTGGAAATTCACAGTTAACCTCCCCTTCAACTCTTGTGTTGACCTCATACGTAGCTGGTTGTATGAGGTCAACACAAGAGTTGAAGGGGAGGTTAACTGTGAATTTCCAAGGTGAAGAAGGTATTGATGCTGGAGGGTTAACAAGGGAGTGGTACCAGTCACTATCACGAGTTATTTTTGATAAAGGAGCACTACTGTTTACTACTGTGGGAAATGATTCAACTTTTCAACCGAATCCCAATTCTGTCTATCAAACAGAGCACTTGTCCTACTTTAAATTCGTTGGCAGAGTTGTAGGGAAAGCACTTTTTGATGGACAGCTCTTGGATGTGCATTTCACTCGCTCATTCTACAAGCATATCCTAGGTGCCAAAGTGACCTATCATGATATAGAAGCAATTGATCCAGATTACTACAAGAATTTGAAGTGGATGCTTGAGAATGATATAAGCGATGTGCTGGATCTTACTTTTAGCATCGATGCTGACGAGGAGAAGCTGATATTATATGAAAGAACAGAGGTGACTGATTATGAGCTCATTCCTGGTGGACGGAACATAAAAGTCACAGAGGAAAACAAGCACCAATATGTTGATTTAGTTGTTGAGCATAGATTGACCACTGCAATCCGACCACAAATTAATGCCTTCTTGGAAGGCTTCAATGAGTTGATCCCTCGTGAACTGATATCCATTTTTAATGACAAGGAACTTGAATTATTAATCAGTGGGCTTCCAGATATCGATTTGGATGATATGAGGGCAAATACAGAATATTCAGGGTACAGTCCTGCATCTCCTGTTATCCAGTGGTTCTGGGAGGTGGTTCAGGGTCTTAGCAAGGAAGATAAGGCTCGTCTTCTTCAGTTTGTTACAGGCACATCGAAGGTACCTCTGGAAGGTTTTAGTGCCCTTCAAGGCATTTCAGGCTCGCAAAAGTTCCAAATTCACAAAGCATATGGCAGTGCTGATCATTTACCCTCAGCACATACATGCTTCAACCAGTTGGATCTACCGGAGTATCCTTCAAAAGAACACCTGCAGGAGAGGCTACTGCTTGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101518.p1 GENE.S_Transcript_101518~~S_Transcript_101518.p1 ORF type:internal len:366 (-),score=64.38,HECT|PF00632.21|7.7e-91 S_Transcript_101518:3-1097(-)
LLTLQHQYLLHLGNSQLTSPSTLVLTSYVAGCMRSTQELKGRLTVNFQGEEGIDAGGLTREWYQSLSRVIFDKGALLFTTVGNDSTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGAKVTYHDIEAIDPDYYKNLKWMLENDISDVLDLTFSIDADEEKLILYERTEVTDYELIPGGRNIKVTEENKHQYVDLVVEHRLTTAIRPQINAFLEGFNELIPRELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSPASPVIQWFWEVVQGLSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSADHLPSAHTCFNQLDLPEYPSKEHLQERLLLA

Click here to download the sequence:
Link to NCBI Protein BLAST