Transcript Information: S_Transcript_101612.p1


Annotated TAIR IDAT2G40770.1
Annotated Gene Namezinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17013535-17021315 | Reverse length=1664
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.345017460128
Replicate 29.7804118657024
Replicate 310.378932131947
Condition 2: 8 Hour
Replicate 112.001189941964
Replicate 212.047423645893
Replicate 312.150937991924
Condition 3: 24 Hour
Replicate 110.597881620664
Replicate 28.8236307046786
Replicate 39.8808009009733


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101612.p1 GENE.S_Transcript_101612~~S_Transcript_101612.p1 ORF type:3prime_partial len:1649 (+),score=362.02,SNF2_N|PF00176.19|1.2e-77,SNF2_N|PF00176.19|5.5e+03,Helicase_C|PF00271.27|8.4e-07,PHD|PF00628.25|4e-06,PHD|PF00628.25|4.1e+03,PHD|PF00628.25|4.6e+02 S_Transcript_101612:266-5209(+)
ATGGGTAGGAAGAAAAATAAACCTCAACGCTCAGTGGGCATACTAGAAAACAGTAGTACAAGCAATTATGGTGAAAATAAAGCAACCCCAGAAGCTAATTTTAAGGTAAAAGACGATGGGCATCATCAAGATGACCCCTTTTATTTTGTTGATGTTGATTGTACTAGTTGGGGTTCAATTGAGCATAGGGATATATCTGAAGTAGTGCTCACTAATTTGATATTAACACAAGATTTTATTGGGTTTGATTTGACTGGTGAGGTTAATTTAAGGTTTAGGTTATGTAATGTGAATGAGCATGTGGTTAGGATTAAATTAGGGCATTGGCCCGTTTTGGCTTCAGAAAATGTTTACTTGGAGGTTATACAGAAAATGGTAGTGGACAAAATTGAAGCTTTTGATGTTATTGCTTGTGGGAAATTTGATGGTAGTGATGAGGGGGTTACTGGGTTGGTTCACTTGACTAGTTTGAAGTTGTTGTCATTGAGATTGGTACCTGGGGTTCAGTTATATGAGGATGTCTCTTCACTTAGGTTAAGGGTTGAGATACTTGGGAGTGCCTTTGAGGCTTGTGAGGGTCTTATTGAGAATAGTAGGCAACTTTGGAAGAAGAGCATGATGAGTGTCATGGCCTGGCTCAGGCCTGAAGTGACCAGTTCCGAGGCTCGGTATGGGGTTCATGTGTTAAGTGGAATGGAAGTTGGTTCTAATGTTGGGGTGGACAATGCTGGTTCCAGAGAAAAATCATTTGATGTCCAATGTTTTTATGAAGCCATTAAACGATCCAAAGATTGTCCAATGTTGGATGCTGAGTTGCCTGACTTGTTACCTGAGCTTAGACCATATCAGCGTCGAGCTGCTTACTGGATGGTACTAAGAGAGAAGGGGGCTTTGCAAAATCTGTCTGCAGAGGAACAAAGTCTTTTCTTTGCTCCTTTGTGTGTGTCTGTGAATTTTCTGGACTCGTGCTTGAGTATGTTCTACAATCCCTTCAGTGGGACTGTGTCCTTGTGTCCAGAGATTCCCTCTTCATATGTCTTTGGTGGTATTCTTGCTGATGAAATGGGCTTGGGGAAAACTGTTGAGCTTCTTGCTTGTGTATTTACTCATCGCAAATCATCTGAGAGCGGCAGTTGTTCTGGAAATATGTCAGATGATACGCTGATGGAGAAAATCCGCCTTAAGAGAGTGAAAAAAGAGCGTATTGAATGTATATGTGGTGCATTGAGTGAAAGCCACAAATATAAAGGATTATGGGTTCAGTGTGATGTGTGTGATGCATGGCAGCATGCAGATTGTGTCGGCTATTCACCTTCTAGGGCTAGGAAAAGATCCAAAGGAGCTTCTAAAGGGCAAGATGGTAACAATATGACGAAGAAGAAAAATGTCGATATAGTTGTGATGGATGATCAATTTATCTGTCAACTCTGCTTAGAGTTGATGCAAGTTACCGGCTCTCTAGTTGACTCCGGTGCAACTCTCATTGTCTGTCCTGCTCCCATACTGCCTCAGTGGCATGCTGAAATATCACGTCACACAACTCCAGGTTCCTTGAGAACTTGTATTTATGAAGGTGTCAAAGACATTTCTCTATCGAATTCATCTGCAATAGATGTCAGTGAACTAGCCAGTGCTGATATTGTGTTGACAACATATGATGTACTGAGAGAAGATCTGTCACATGACTCAGAAAGACATGAAGGAGATCGTCGCTTAATGAGATATGAGAAAAGGTATCCTGTGATCCCGACCCTACTCACTAGAGTATTCTGGTGGAGGGTTTGCTTAGATGAAGCTCAAATGGTGGAGAGCAATGTTGCTGCTGCAACAGAGATGGCATTGCGTCTACATGCGAGGCATCGTTGGTGTATAACAGGAACTCCCATCCAGCGCAAACTGGATGATTTATATGGTCTGCTCAGATTTCTCAAAGCTAGTCCATTTGATGTGTCTAGATGGTGGGTTGAAGTTATCAGAGATCCATATGAGTGCAGGGATGCTGCTGCTATGGATTTCACACATCATTTATTCAGACAATTGATGTGGCGTTCCTCTAAGTCGCATGTTGCAGATGAGCTTCAGCTTCCTCCACAGGAGGAACGTGTATCTTGGCTTTCTTTCTCACCAGTTGAAGAGCACTTTTATCAGAGACAACATGAAACTTGTGTGGATTTTGCTCATGAAGTTCTTGAAAGGTTTAAAAGTGATATGTCGCAGAGAGAGAGCTCAGGTTCTTTATCATCTGATTCTCTATCTGATCCCTTTATCACCGATTTGGAGGCTGCCAAACTGCTGAATTCACTTCTTAAGCTTCGTCAAGCCTGCTGCCATCCCCAAGTTGGTGGATCTGGACTGCGCTCACTTCAAAGATCTCCTATGACTATGGATGAAATATTGACGGTCCTTATAAGTAAGACTAAGATTGAGGGGGAAGATGCATTACGAAAAGCTGTTTCTTCATTGAATGGACTTGCTGGTATAGCTATGATCCAAAGTGACCTATCTCAAGCTGCATCATTGTACAAGGAAGCACTAGCTTTGGCTGAGGAACATTCTAAAGATTTTCGTCTAGACCCTTTGCTAAATCTTCATGTACATCATAATCTTGCTGAGGTTCTGAAATCAGCTTTATCCATCTCACTACAAAAGCCATTTTGTGGGGGACAATTGAGTGATATTTTTGAAGAGAAGCCATATCAGAATAGCAGCATCATTGAATTTGGCAGTCCCATTATGAAAAAACCGAAAATGGCAGGAGAGAAATCTATGGAGATTGATAATATCAATAAATGTGCGAAATTGAACTGTGAACATGCAGTTGATGGCTTAAAAGGTGGTGAAGAATGTGATACAAAGCCCCATGCACCAGATGTTACCAGTGCTGAAAGCTTGATCAATGTTTCTGAGAGTATAAAACAAAAGTACTTGTCTGTATTTTACTCAAGATTGTCGCAATCTCAACAGGAGTTCCAGAAGTCCTATATGCAGGTTTGTGATGGATTAAGCGGTAGAAAGGACAAGAATGCAGTATGGTGGCTGGAAGCCCTCCAAAAAATTGAACAGAACAAAGAAGCTGCTAAAGAGCTATCACAGAAGATTGAAAATGCTGTGTTAGGCAACCGGAACTCAGCTACAATGGCATCCTGGTTTCGGAATATGAATTCACTTAAATACTATATTCAGACTGGCTTAGATTCACTGGAAACCTCTCGAAAACATTTATTTGATCAACTCCTTGAGGTTGATCGCACCATGGAAAAACCAAGGGAGGAAGATATTGAACGTGTACGACACTGTCCGAATTGCTATCCGAATGCGGATGGTCGTTTGTGTGTTCACTGTGAATTGGATGAACTCTTCCAGGCTTACGAGGCTAGGCTCTTTTGCAAAAAACGCAATAATGGGGCAGTTATATCATCTGCAGAGGAGGCAGTAGATCTGCAAAAGAAAAAATTAGAATTGAATCATTTCTATTGGAATCTGGCACAGAAATCAAAAAGCTCGGCCTCATCTATAGATGTTCAAGATGCGAAAGGCAAGAGGGATGTTGCAAAAGTTTTGATGGATATAAGAACCCCATCAGAGCTGGAAATTATCCTGGGGATATTAAGGAGTTATTTCAAGGCACAATTAGGGAGAGAAGGTGTATCAGCCGCCAGGAGACACGTACTTCTTCTTGAGAGTATGAGGAAAGAATACGCTCAAGCAAGGTCATTAGCTATTGCTCAAGCTCAGGTTCTTCGGGCTCATGATGAAATCAAAATGGCAACTTCGAGATTGCGTTTACGAGAGAACAATGACGATAATGCTATAGATGCTGTAAGCTTGGAAGAACTTGACATAGCTAGTGTAGAGAACTCCAGTGAAAAGTTTCTGTCCTTGGCTACATTATCACGAATAAGAGGAAAACTCCGTTATTTGCAGGGATTAGTGTCGTCCAAACAGAAAACAGGTTCAGATAGCAAGGTAGCTGCTCCACTGGGTTCACCTCCTGCAGAAACCAAAGTGGCTGAGGATTTATGCCCCATTTGTCAAGAAAGTCCTGAATATCAAAGAATGGTTTTTCAATGTGGACATGTAACTTGCTGTAAATGTTTGCTTGCTATAACCGAGCGGAAGGCGGTTCCCAATGGAAAGTCGCAAGACAAGTGGGTGATCTGCCCTACATGCCGACAACATTCAGATTTTGAGAGTATTGCTTTTGCTGACGACAGGCAAAATAATTCTTCTGATAGATGTGAAAATATTGAAGCTTCTGTGTCTGTTCAAGGATCATATGGAACAAAGATTGAAGCAATCACGAGGAGGATCCTCCAGATAAAGTCAACTGATCCCAATGCTAAAATTCTAGTTTTCTCCAGTTGGAATGATGTCCTTGACGTACTAGAGCATGCTTTTGGTGCCAACGAGATCAGCTATGTTCGAATGAAAGGGGGGAGGAAAAGATCTCAAGTTGCAATTAGCATCTTCAAGGGAGAAAAGATTACGATCAAGGCTTGTGGCAAGACAAATGATCAGCAGAAGTCAGAGGGTAAGTTTGTGCAGGTGCTACTGCTCTTAATTCAACATGGAGCAAACGGCCTCAATCTTCTTGAAGCACAACATGTTATTCTTGTCGAGCCCCTACTCAATCCAGCAGCTGAAGCACAAGCAATCAGCAGGGTGCATCGGATTGGACAGACAAATAGGACGCTCATTCATAGGTTCATAGTAAAGAACACAGTTGAAGAAAGCATATACAAACTAAACAAAAGTAGGAATAGCAGCTCATTTATCAGTGGGAATAAGAAGAATCAAGATCAGCCTATTTTGACATTAAAGGATGTTGAGTCCTTATTTGCAGTGGTGCCTTCCGAAACAACAGAAGAGCAAACAGAGAGTTTAACACATTTGCCTCCTTCTGTTGCTGCTGCCATAGCTGCTGAAAGAAGACTTAACCAATGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101612.p1 GENE.S_Transcript_101612~~S_Transcript_101612.p1 ORF type:3prime_partial len:1649 (+),score=362.02,SNF2_N|PF00176.19|1.2e-77,SNF2_N|PF00176.19|5.5e+03,Helicase_C|PF00271.27|8.4e-07,PHD|PF00628.25|4e-06,PHD|PF00628.25|4.1e+03,PHD|PF00628.25|4.6e+02 S_Transcript_101612:266-5209(+)
MGRKKNKPQRSVGILENSSTSNYGENKATPEANFKVKDDGHHQDDPFYFVDVDCTSWGSIEHRDISEVVLTNLILTQDFIGFDLTGEVNLRFRLCNVNEHVVRIKLGHWPVLASENVYLEVIQKMVVDKIEAFDVIACGKFDGSDEGVTGLVHLTSLKLLSLRLVPGVQLYEDVSSLRLRVEILGSAFEACEGLIENSRQLWKKSMMSVMAWLRPEVTSSEARYGVHVLSGMEVGSNVGVDNAGSREKSFDVQCFYEAIKRSKDCPMLDAELPDLLPELRPYQRRAAYWMVLREKGALQNLSAEEQSLFFAPLCVSVNFLDSCLSMFYNPFSGTVSLCPEIPSSYVFGGILADEMGLGKTVELLACVFTHRKSSESGSCSGNMSDDTLMEKIRLKRVKKERIECICGALSESHKYKGLWVQCDVCDAWQHADCVGYSPSRARKRSKGASKGQDGNNMTKKKNVDIVVMDDQFICQLCLELMQVTGSLVDSGATLIVCPAPILPQWHAEISRHTTPGSLRTCIYEGVKDISLSNSSAIDVSELASADIVLTTYDVLREDLSHDSERHEGDRRLMRYEKRYPVIPTLLTRVFWWRVCLDEAQMVESNVAAATEMALRLHARHRWCITGTPIQRKLDDLYGLLRFLKASPFDVSRWWVEVIRDPYECRDAAAMDFTHHLFRQLMWRSSKSHVADELQLPPQEERVSWLSFSPVEEHFYQRQHETCVDFAHEVLERFKSDMSQRESSGSLSSDSLSDPFITDLEAAKLLNSLLKLRQACCHPQVGGSGLRSLQRSPMTMDEILTVLISKTKIEGEDALRKAVSSLNGLAGIAMIQSDLSQAASLYKEALALAEEHSKDFRLDPLLNLHVHHNLAEVLKSALSISLQKPFCGGQLSDIFEEKPYQNSSIIEFGSPIMKKPKMAGEKSMEIDNINKCAKLNCEHAVDGLKGGEECDTKPHAPDVTSAESLINVSESIKQKYLSVFYSRLSQSQQEFQKSYMQVCDGLSGRKDKNAVWWLEALQKIEQNKEAAKELSQKIENAVLGNRNSATMASWFRNMNSLKYYIQTGLDSLETSRKHLFDQLLEVDRTMEKPREEDIERVRHCPNCYPNADGRLCVHCELDELFQAYEARLFCKKRNNGAVISSAEEAVDLQKKKLELNHFYWNLAQKSKSSASSIDVQDAKGKRDVAKVLMDIRTPSELEIILGILRSYFKAQLGREGVSAARRHVLLLESMRKEYAQARSLAIAQAQVLRAHDEIKMATSRLRLRENNDDNAIDAVSLEELDIASVENSSEKFLSLATLSRIRGKLRYLQGLVSSKQKTGSDSKVAAPLGSPPAETKVAEDLCPICQESPEYQRMVFQCGHVTCCKCLLAITERKAVPNGKSQDKWVICPTCRQHSDFESIAFADDRQNNSSDRCENIEASVSVQGSYGTKIEAITRRILQIKSTDPNAKILVFSSWNDVLDVLEHAFGANEISYVRMKGGRKRSQVAISIFKGEKITIKACGKTNDQQKSEGKFVQVLLLLIQHGANGLNLLEAQHVILVEPLLNPAAEAQAISRVHRIGQTNRTLIHRFIVKNTVEESIYKLNKSRNSSSFISGNKKNQDQPILTLKDVESLFAVVPSETTEEQTESLTHLPPSVAAAIAAERRLNQC

Click here to download the sequence:
Link to NCBI Protein BLAST