Transcript Information: S_Transcript_101647.p1


Annotated TAIR IDAT5G23880.1
Annotated Gene Namecleavage and polyadenylation specificity factor 100
Annotated Gene Symbol(s)EMB1265, CPSF100, ESP5, ATCPSF100
Annotation TypeOrtholog
Chromosome Positionchr5:8052550-8058147 | Forward length=739
E-Value5.9E-256
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.070691704942
Replicate 215.820402015324
Replicate 315.893416192995
Condition 2: 8 Hour
Replicate 121.049035367019
Replicate 217.539915888166
Replicate 317.724840881032
Condition 3: 24 Hour
Replicate 115.852874412181
Replicate 213.167527676107
Replicate 312.256933026244


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101647.p1 GENE.S_Transcript_101647~~S_Transcript_101647.p1 ORF type:5prime_partial len:463 (+),score=82.96,Lactamase_B_6|PF16661.1|1.8e-57,Beta-Casp|PF10996.4|3.6e+03,Beta-Casp|PF10996.4|2.3e-22 S_Transcript_101647:3-1391(+)
AAGCGCAAAGCAAAATTTCCCTCTCGAGGAAGGAGGAGAGAGAAAGAGAAGGAGAACGGAATGGGAACATCAGTAGAAGTGACTCCACTGTGTGGAGTATACAACGAGAACCCACTCTCATATCTTGTCTCCATTGATGGCTTCAACTTCCTCATTGATTGCGGTTGGAATGACCACTTTGATCCCTCCCTTCTTCAACCCCTCTCCAAGGTTGCTTCTACTGTAGATGCGGTTCTCCTATCATATCCTGATACGCTGCACCTTGGTGCCTTGCCATATGCAATGAAGCAATTTGGACTATCTGCACCAATTTACGCAACAGAGCCTGTGTACAGACTGGGCCTGCTGACTATGTATGATCACTATCTTTCACGCAAGCAAGTATCGGAGTTTGATTTGTTCACACTGGATGATATTGATGCCGCTTTCCAAAATGTCACAAGATTGACGTACTCCCAGAACTGTCACTTGTCTGACAAAGGTGAAGGAATTGTTATTGCTCCCCATGTTGCTGGGCATCTACTGGGAGGCACAGTGTGGAAAATAACAAAGGATGGGGAGGAAGTTTTATATGCTGTTGACTTCAATCATCGCAAGGAAAGGCATTTAAATGGGACAATTCTTGAATCGTTTGTACGCCCAGCTGTACTAATAACGGATGCTTACAATGCTCTGAGTAATCAACCACCGAGACGCCAAAGAGATCATGAATTTTTAGATGCTATAACGAAAGCTCTTCGAGCTGAAGGAAAGGTGTTGCTTCCGGTTGATTCAGCGGGACGAGTATTGGAACTTATTTTAATACTAGAACAGCACTGGACCCAACATCATTTGACTTATCCAATATACTTTCTCACATATGTTTCCTCAAGTACGATAGATTATGTAAAGAGTTTCCTGGAGTGGATGAATGACTCCATAGCAAAGTCCTTTGAGCACACACGTGATAATGCTTTTCTTCTGAAGCATGTCTCGCTTCTGATCAACAAGAGTGAACTTGAGAAAGTCCCAGATGGTCCAAAGATTGTTTTAGCTTCCATGGCCAGTCTTGAAGCAGGATTTTCTCATGACATATTTGCGGAATGGGCAACTGATCCCAAGAATCTTGTCCTTTTTACAGAAAGAGGCCAGTTTGCCACATTAGCTCGCATGCTTCAAGCAGATCCACCTCCAAAAGCTGTCAAAATTACCTTATCTAAAAGAGTGCCTTTGGTGGGGGAGGAATTAGCGGCCTACGAAGAAGAGCAAAATCGCAAAAAGGAAGAAGCTTTAAAAGCAAGTCTGAACAAAGAAGAAGAGGTGAAGACAGGTTTGGATGCTAATCTAGGTGATCAAATGGTGATTGATTCTCGGGACACCCATGCTTTATCAGATGCAGATGGCCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101647.p1 GENE.S_Transcript_101647~~S_Transcript_101647.p1 ORF type:5prime_partial len:463 (+),score=82.96,Lactamase_B_6|PF16661.1|1.8e-57,Beta-Casp|PF10996.4|3.6e+03,Beta-Casp|PF10996.4|2.3e-22 S_Transcript_101647:3-1391(+)
KRKAKFPSRGRRREKEKENGMGTSVEVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTVDAVLLSYPDTLHLGALPYAMKQFGLSAPIYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDIDAAFQNVTRLTYSQNCHLSDKGEGIVIAPHVAGHLLGGTVWKITKDGEEVLYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALSNQPPRRQRDHEFLDAITKALRAEGKVLLPVDSAGRVLELILILEQHWTQHHLTYPIYFLTYVSSSTIDYVKSFLEWMNDSIAKSFEHTRDNAFLLKHVSLLINKSELEKVPDGPKIVLASMASLEAGFSHDIFAEWATDPKNLVLFTERGQFATLARMLQADPPPKAVKITLSKRVPLVGEELAAYEEEQNRKKEEALKASLNKEEEVKTGLDANLGDQMVIDSRDTHALSDADGH*

Click here to download the sequence:
Link to NCBI Protein BLAST