Transcript Information: S_Transcript_101782.p1


Annotated TAIR IDAT5G16000.1
Annotated Gene NameNSP-interacting kinase 1
Annotated Gene Symbol(s)NIK1
Annotation TypeOrtholog
Chromosome Positionchr5:5224264-5227003 | Forward length=638
E-Value8.5E-94
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8194585106046
Replicate 25.7199824778742
Replicate 33.6714706092353
Condition 2: 8 Hour
Replicate 16.417362826915
Replicate 25.9036822799279
Replicate 36.3158066977723
Condition 3: 24 Hour
Replicate 13.8430813548267
Replicate 22.9379015006376
Replicate 33.2695242747373


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101782.p1 GENE.S_Transcript_101782~~S_Transcript_101782.p1 ORF type:3prime_partial len:216 (+),score=31.01,LRRNT_2|PF08263.8|9.8e-15,LRR_8|PF13855.2|1e-07,LRR_8|PF13855.2|7.6e-06,LRR_4|PF12799.3|5.2e-05,LRR_4|PF12799.3|0.038 S_Transcript_101782:250-894(+)
ATGAGAAATACTCACCTGGGTTTTCTACTCACTTTGTTCTGTTTTTACTACACTTCCTCTGCTTGGCTTTCACCTGATGGAGTCAATTATGAAGTTCAAGCATTGATGGCTATCAAAGAGTCACTTAAAGACCCTCATGGTGTTCTTGAGAAATGGGATGTTAATTCTGTGGATCCTTGTAGTTGGGCCATGGTTACTTGCTCTCCTTTAGGCCAAGTTATTAATTTGGGAATTCCAAGCCAGGAGTTGTCTGGGACTTTATCACCAAGTATTGGCAACTTGACAAATCTTCAGAGTGTGCTACTGCAGAACAACAATATATCAGGTCCAATTCCTGCAGAACTAGGAAGATTGTCAAAATTACAAACACTTGATTTGTCCAACAATTTGTTCAGAGGATCAACTCCCAGTTCTCTGTCTCATCTTAACAATCTTCATTACTTACGGTTGAACAATAACAGTCTTTCTGGAGCAATTCCACTGTCAATTGCCAATATGACCCAGCTCACACTCATAGATTCATCCTACAATGATTTGAGTGTTCTTGTTCCCAGATTCCAAGCAAAAACCTTCAGTATTGTAGGAAATCCTCGAATATGTGCCACGGGGAGCGAAAAGGATTGTTTTGGGACATCACAATTGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101782.p1 GENE.S_Transcript_101782~~S_Transcript_101782.p1 ORF type:3prime_partial len:216 (+),score=31.01,LRRNT_2|PF08263.8|9.8e-15,LRR_8|PF13855.2|1e-07,LRR_8|PF13855.2|7.6e-06,LRR_4|PF12799.3|5.2e-05,LRR_4|PF12799.3|0.038 S_Transcript_101782:250-894(+)
MRNTHLGFLLTLFCFYYTSSAWLSPDGVNYEVQALMAIKESLKDPHGVLEKWDVNSVDPCSWAMVTCSPLGQVINLGIPSQELSGTLSPSIGNLTNLQSVLLQNNNISGPIPAELGRLSKLQTLDLSNNLFRGSTPSSLSHLNNLHYLRLNNNSLSGAIPLSIANMTQLTLIDSSYNDLSVLVPRFQAKTFSIVGNPRICATGSEKDCFGTSQLP

Click here to download the sequence:
Link to NCBI Protein BLAST