Transcript Information: S_Transcript_101858.p1


Annotated TAIR IDAT1G58370.1
Annotated Gene Nameglycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
Annotated Gene Symbol(s)RXF12, ATXYN1
Annotation TypeOrtholog
Chromosome Positionchr1:21684751-21688209 | Forward length=917
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2087595670623
Replicate 24.4687092316918
Replicate 35.0067236875946
Condition 2: 8 Hour
Replicate 17.6210567729309
Replicate 27.8289608177198
Replicate 38.3409838454275
Condition 3: 24 Hour
Replicate 14.9805407746318
Replicate 24.9990167633937
Replicate 35.9644919430974


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101858.p1 GENE.S_Transcript_101858~~S_Transcript_101858.p1 ORF type:complete len:943 (+),score=161.38,CBM_4_9|PF02018.13|2.4e-23,CBM_4_9|PF02018.13|6.3e-19,CBM_4_9|PF02018.13|1.8e-20,Glyco_hydro_10|PF00331.16|5.6e-46 S_Transcript_101858:384-3212(+)
ATGACCTATAAAATGACCAAGTTTCTGGGTTGTTGCTTCGCACTTCGACCCCAGAAAAGTAAAAGCAAGACCCATCTGGGATCTAGAGAGACAATGGAGCACCCAAAAGAGAGCAGCAGCCACATTACTGAGGAAGAGAAATTAAGAGGAGATATGACCAGTACAAGGAGTGATGACACAGAAAATATCATACTGAACCATGATTTCTCCCAAGGCCTGTATTCATGGCATTCCAACTGCTGCAATGCGTACAAAGTTTCAGCTGAGGCCGGACATCCGGAAGGAACGACAACAAACTTGGGTGGTGGCTATGTTGCAGTTACAAATAGGACAGAGTGCTGGCAAGGATTGGAACAAGATATAACCAGCAGAGTCTCTCCAGGTTCTGAATGTAAAGTTTCTGCTTGTGTTGCAGTATCAGGATCTGATGGTCCATCTGATGTTCAAGCCACGTTAAAATTAGAGTATAATGGATCTGACACCAAGTATTTGTTCATCGGAAGGGTAACGGCTTCAAAGGAGCGGTGGGAAAAATTGGAAGGCACTTTCACTCTTTCATCAATGCCTGACCGTGTTGTGTTCTATCTGGAAGGGCCATGTCCTGGTGTTGACCTGTTTATAAAATCAGTTGTTGTTTCCTGCCCCAGCTCCACTAATGAGAGATGTTCTGATGGAGATGAGAACATAATTATAAACCCCAGTTTTGAGGATGGCCTCAATAGCTGGTCTGGAAGAGGCTGCAAAATCGTGCTGCATGATTCTATGGCAGGCGGAAAGATTGTTCCACAGTCAGGCAAGGTCTTTGCTGCAGCAAACGAACGCACACAGTTTTGGAATGGAATTCAGCAGGACATCACAGGGAGAGTAAAGAGAAAGCTCGCTTATGAGGTTACTGCAATTGTCCGGATATATGGTAATAATGTCACCAGCGCAGATGTCCGAGCCACTCTGTATGTTCAAACAACAGATAAGCGTGAACAGTATATTGGTATCTCAAGTGTTAAAGCAACAGACAAAGATTGGGCGCAGATTCAGGGCAAGTTTCTTATAAATGGTACTCCATCAATTGTGGTCATCTACTTGGAAGGACCAGCTCCTGGTACTGACATTCTTCTCAACAGTATGGTAGTAAAGCATGCACAGAAAACTCCTCCATCTCCTCCACCTATTGTTGAGAATGCTGCTTTTGGAGTGAATATCATTCAGAACAGTGAGCTCAGTGACGGTACCAATGGCTGGTTTCCTCTTGGCAATTGCACCCTAGGAGTTGGTACTGGTTCACCACATATTCTTCCTTCAATGGCCAGTGGCTCTCTTGGACCTCACGAGCCTTTAAGTGGACGTTACATTCTTGTCACAAATCGCACACAGAACTGGATGGGTCCTGCACAGATGATAACTGACAGGCTGAAGCTCTTTCTCACATATCAGGTATCTGCCTGGGTTAAACTAGGGTCTGGTGTTTCTGGGCCCCAAAATGTCAATGTTGCCCTCAGTGTGGATGGTCAGTGGGTCAATGGAGGTCAAGTTGAGATCACTGATGACAGATGGCATGAAATTGGAGGGTCTTTTCGGATTGAGAAGCAGCCGTCAAAAGTTATGGTTTATGTTCAGGGCCCAGGCCCTGGAGTCAACTTTATGCTCGCCAGTCTCCAGATTTTCGCTGTTGATCGAAAATCAAGGTTCAAACATCTGAGGAGGCAGACTGACAAGATACGTAAACGTGATGTGGTCTTGAAACTTGCTGGCGAAACTGGTTCATTTGGCGCCTTTGTGAAAGTCAAACAGACAAAGAATAGCTTCCCATTTGGTTCCTGCATTAACAGAACCAACATAGACAATGAAGACTTTGTGGACTTCTTTCTAAAGAACTTCAACTGGGCTGTGTTTGGAAATGAACTCAAGTGGTACTGGACTGAGTCCCAGAAAGGTAATTTCAACTACAGGGATGCTGATGAGATGTTGGATTTGTGCCAAAAAAACAACATAGAAACTCGGGGGCATTGCATCTTCTGGGAAGTGGAAGACACAGTCCAATCATGGGTCAAGGCCCTTAATAAAAATGACCTAATGAAGGCAGTACAAAATCGTCTGACAGGCCTCCTTACGCGCTACAAGGGGAAGTTCCGGCACTATGATGTGAACAACGAGATGCTACATGGATCTTTCTACCAGGACCGTCTGGGTAAAGATATCAGAGCCAACATGTTCAAGACTGCCAACAAAATAGACCCATCTGCCTTGCTATTTGTCAATGATTATCATGTTGAGGATGGATGCGATACAAGGTCAAGCCCCGAGAAGTACATTGAGCAAGTGCTGAACCTGCAAGAGCAAGGTGCACCTGTCGGAGGTGTAGGAATTCAAGGCCATATTGATAGTCCTGTAGGCTCAATCGTCTGTTCAGCCCTGGATAAGTTGGGAATTCTCGGACTTCCAATCTGGTTTACTGAGCTCGATGTTTCTTCCATTAACGAACACATAAGAGCCGATGATTTGGAGGTTATGCTTAGAGAGGCCTACGCTCATCCAGCAGTTGAAGGTGTCATGTTATGGGGGTTCTGGGAGTTGTTTATGAGCAGAGATAATTCACACCTTGTGAATGCTGAAGGTGATCTGAATGAGGCTGGTAAGAGGTATCTCCAACTTAAGCATGAATGGCTAACTCATGCTCATGGTCATACTGACGATGGCCAGTTTTGCTTCAGGGGCTTCCATGGCACTTATGAGGTCGAAATTGCTTTGTTCGAAAAGACAATTACCAAGACATTTGTGGTCGACAATGGCGATTCTCCACTCGTCGTGCCCATAGATCTGTCATACTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101858.p1 GENE.S_Transcript_101858~~S_Transcript_101858.p1 ORF type:complete len:943 (+),score=161.38,CBM_4_9|PF02018.13|2.4e-23,CBM_4_9|PF02018.13|6.3e-19,CBM_4_9|PF02018.13|1.8e-20,Glyco_hydro_10|PF00331.16|5.6e-46 S_Transcript_101858:384-3212(+)
MTYKMTKFLGCCFALRPQKSKSKTHLGSRETMEHPKESSSHITEEEKLRGDMTSTRSDDTENIILNHDFSQGLYSWHSNCCNAYKVSAEAGHPEGTTTNLGGGYVAVTNRTECWQGLEQDITSRVSPGSECKVSACVAVSGSDGPSDVQATLKLEYNGSDTKYLFIGRVTASKERWEKLEGTFTLSSMPDRVVFYLEGPCPGVDLFIKSVVVSCPSSTNERCSDGDENIIINPSFEDGLNSWSGRGCKIVLHDSMAGGKIVPQSGKVFAAANERTQFWNGIQQDITGRVKRKLAYEVTAIVRIYGNNVTSADVRATLYVQTTDKREQYIGISSVKATDKDWAQIQGKFLINGTPSIVVIYLEGPAPGTDILLNSMVVKHAQKTPPSPPPIVENAAFGVNIIQNSELSDGTNGWFPLGNCTLGVGTGSPHILPSMASGSLGPHEPLSGRYILVTNRTQNWMGPAQMITDRLKLFLTYQVSAWVKLGSGVSGPQNVNVALSVDGQWVNGGQVEITDDRWHEIGGSFRIEKQPSKVMVYVQGPGPGVNFMLASLQIFAVDRKSRFKHLRRQTDKIRKRDVVLKLAGETGSFGAFVKVKQTKNSFPFGSCINRTNIDNEDFVDFFLKNFNWAVFGNELKWYWTESQKGNFNYRDADEMLDLCQKNNIETRGHCIFWEVEDTVQSWVKALNKNDLMKAVQNRLTGLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRANMFKTANKIDPSALLFVNDYHVEDGCDTRSSPEKYIEQVLNLQEQGAPVGGVGIQGHIDSPVGSIVCSALDKLGILGLPIWFTELDVSSINEHIRADDLEVMLREAYAHPAVEGVMLWGFWELFMSRDNSHLVNAEGDLNEAGKRYLQLKHEWLTHAHGHTDDGQFCFRGFHGTYEVEIALFEKTITKTFVVDNGDSPLVVPIDLSYC*

Click here to download the sequence:
Link to NCBI Protein BLAST