Transcript Information: S_Transcript_101971.p1


Annotated TAIR IDAT5G52800.3
Annotated Gene NameDNA primases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21396053-21399419 | Forward length=614
E-Value4.6E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.925398609058
Replicate 24.1430887260677
Replicate 33.9419588575635
Condition 2: 8 Hour
Replicate 12.4743964337437
Replicate 22.7324395285162
Replicate 31.9525967271739
Condition 3: 24 Hour
Replicate 14.7358373368922
Replicate 24.8441734667002
Replicate 34.6208325627694


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101971.p1 GENE.S_Transcript_101971~~S_Transcript_101971.p1 ORF type:complete len:655 (+),score=109.69,Herpes_UL52|PF03121.11|5.1e-14 S_Transcript_101971:141-1967(+)
ATGGACGATGTTGATCGTTTGTTCGAATGCTTCAAATGCGGTGTCTCTCCTCCTCAATCTGCTGTGAGAGAGAGAAAGACAAGTATGAGTAGGTTGAAGAAAGGAAATTCAAGGGTTGAGGGGAATAAATCTCCAGGTTCAGCTGGACAAGGCACAAAAGTAACCCCAGATGTAAATCAAAGATCAGAAATGCTTGGATCAGTGACAGATAAAGCAAGCAATCTCAACAGTGGTAAGCAGTTTTCTCCTGTTGTGTTTTATGGTTCGCCACATGGAGTCCCTCCAAAGAGACCATCTAGTTTTCTGCGCTTGTTGCGTGAAATACACATTGATCTTGCTGGAAGACGTAAATCCAAACTGAGGAAACAAGTATGGGCTACATTCCCAAAGCAGGATGAAGCTATGAAATTTATAAAAGAACAGGAGAATGTTCGCATTTTCAGTTATCAAGATCACTTTAATGGACAAAGAAGATTTCTGGTTTCAACTTATCAAGAGTTTTGGAACAGGTACAAGAATATTGATCCGAAATGCCGACATCATTATGAGGTGATTCAAGAGGGTTTGCCGTGTCATCTATACTTTGATTTGGAATTCAATAGGAAGGAAAATCCAGATAAAAATGGCAATCAAATGGTTGATCTTCTATTATTGGTCATTTTTGAGGCATTAGATGAGAAATATCAAATAAAAGGGGAGCAAGATTGGATAGTAGAACTTGATTCCTCCACTGAAGCAAAATTTTCTCGCCATCTGGTGCTACGAATTCCAAAGACTGCTTTTAAGGATAATTCACATTCTGGTGCGTTCGTTTCTGAGATATGTTCAAGAATTCATAGTGCTGGAGAGAAGGATGCAAGATTCCAGCAGCTTTTTATTACCAAAGAATCAAACTCTGCTGGGCCTTCGCTTCAACTTTTTGTGGACAATGCTGTGTACTCGAGAAATCGTTGCTTTCGTTTAGCTCTATCATCAAAAGCTGGGAAGTCCTCTGTGCTTCTGCCTACTGGGCGTTTCAAGTGTAGAGACATGTCTGAAGAAGAGGTGTTCATGGTATCCTTGATCTGCAATATTGATGATGACTGTGAGAAGCTTTTAGTCTGCAAAATGGAGTTAGATTGTGTCAAAACTCTGCAATTTGATACAGAGGTAAGATTCACTCATAGGAAACCTTTAAGTACTCTTCAAGAATTAACATCTTCCGTTTGCACAAGTGATGCCTCAAGAGCGTACCTTCTGGGAAGATCTCCATATCCTGCCCTGGATGCTTTCATAGAATCTGTTGCTTCTATTGGAAATGTTATGGGAAAGATCCGATGCTGGTACTGGGTCTCTGAGTATGGATTGATGGTGTACACTATGTCAAGGAACAGATACTGTGAACGGATCGGTCGAGAACATAAGAGCAATCATGTTATGTATGTGGTTGACCTACAGTGGGCGCTTTACTATCAGAAATGTTATGATCCTGACTGCAGAGGGTATCGGTCTCCATCTCGGCCCATTCCAGATAACATCATTCCTGAAATTTCCAGTCTAGGGCACAGAGACAGTGAAGGGTTAGCAGAAAATGATCTTGATTTAGCTGATAATGATAAGGAACAGGTCATACTTGATGGTGATCAAAGCATGGTAGATGGAGACTGCAACGATGAGTGGTGGCTTGAAGCAATTGAAGCTGCTGATTATGTTGAAAATAAGGGAAGTTCACTGTTAAATATTAACATGGTTAGTAACTTGTACACTGTTGCCATCCACTTGGTGCTACTCAATTATGACTCCTGCAGGTTTTTATCAGTGGCACCTCTCACTGGTTGTGATGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101971.p1 GENE.S_Transcript_101971~~S_Transcript_101971.p1 ORF type:complete len:655 (+),score=109.69,Herpes_UL52|PF03121.11|5.1e-14 S_Transcript_101971:141-1967(+)
MDDVDRLFECFKCGVSPPQSAVRERKTSMSRLKKGNSRVEGNKSPGSAGQGTKVTPDVNQRSEMLGSVTDKASNLNSGKQFSPVVFYGSPHGVPPKRPSSFLRLLREIHIDLAGRRKSKLRKQVWATFPKQDEAMKFIKEQENVRIFSYQDHFNGQRRFLVSTYQEFWNRYKNIDPKCRHHYEVIQEGLPCHLYFDLEFNRKENPDKNGNQMVDLLLLVIFEALDEKYQIKGEQDWIVELDSSTEAKFSRHLVLRIPKTAFKDNSHSGAFVSEICSRIHSAGEKDARFQQLFITKESNSAGPSLQLFVDNAVYSRNRCFRLALSSKAGKSSVLLPTGRFKCRDMSEEEVFMVSLICNIDDDCEKLLVCKMELDCVKTLQFDTEVRFTHRKPLSTLQELTSSVCTSDASRAYLLGRSPYPALDAFIESVASIGNVMGKIRCWYWVSEYGLMVYTMSRNRYCERIGREHKSNHVMYVVDLQWALYYQKCYDPDCRGYRSPSRPIPDNIIPEISSLGHRDSEGLAENDLDLADNDKEQVILDGDQSMVDGDCNDEWWLEAIEAADYVENKGSSLLNINMVSNLYTVAIHLVLLNYDSCRFLSVAPLTGCDA*

Click here to download the sequence:
Link to NCBI Protein BLAST