Transcript Information: S_Transcript_101988.p1


Annotated TAIR IDAT1G24090.1
Annotated Gene NameRNase H family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8520834-8522737 | Forward length=353
E-Value1E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4238278843539
Replicate 23.6348657125407
Replicate 35.794269574158
Condition 2: 8 Hour
Replicate 19.2328318231265
Replicate 28.4858736219653
Replicate 38.5753409905097
Condition 3: 24 Hour
Replicate 14.8544185534654
Replicate 23.733884665835
Replicate 32.8024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_101988.p1 GENE.S_Transcript_101988~~S_Transcript_101988.p1 ORF type:complete len:261 (+),score=67.01,RVT_3|PF13456.2|6.8e-23,RNase_H|PF00075.20|2.4e-08,Cauli_VI|PF01693.12|3.4e-06,Cauli_VI|PF01693.12|1.7e+03 S_Transcript_101988:154-936(+)
ATGAAAAGGAGGCTTTTTTTCGTGGTTCGGAAAGGGGATGTTGTTGGGGTTTATAAGAGCTTGAGTGAATGCCAAGCTCAAGTTGGCTCTTCGATAAGTGATCCTCCAGCTAGTGTATATAAAGGATATTCTTTGCCTAAGGATGCCGAGGAATATCTCACCTCCTGTGGTCTGCAGAATGCTCTGTACACAATTAAAGCTTCTGATCTGAAGGATGATCTTTTTGGCACACTTGAGCCCTGTCCTTTCCAGGAACCATCATCTTCCAAAGGTCAAACTTCGAGCGTAAACCTTCCACAAAAGAGGCCACATGATGTACTAGAATCAGATTATGTGCACTCTTGTATTCTTGAGTTTGATGGTGCTTCAAAAGGAAATCCTGGCCAAGCTGGTGCTGGAGCTGTGCTTCGAACCCTAAACGGAAGCTTGATTTGCAGTATACGCCAAGGCTTGGGAATTGCCACCAACAATGTTGCAGAATATCGAGCTGTTATTTTAGGGTTAAGGAAAGCTCTTGACATGGGTTATACAAGTATTCAAGCAAAAGGTGACAGCAAGCTTGTCTGTATGCAGATGCAGGGTCTATGGAGGGTAAAAAATCAGAACATGTCTGATTTGCATGCAGAGGCAAAGAAACTGATGGACAGGTTTTCTTCCTGTCAGATCAGTCATGTTTTGAGGGAATTTAATTCAGATGCTGATGCACAAGCAAATTTGGCAATATCTTTAGCTGATGGTCAAGTACAGGAGGATTTGTGTTTGCCGACTTCTGCCAAATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_101988.p1 GENE.S_Transcript_101988~~S_Transcript_101988.p1 ORF type:complete len:261 (+),score=67.01,RVT_3|PF13456.2|6.8e-23,RNase_H|PF00075.20|2.4e-08,Cauli_VI|PF01693.12|3.4e-06,Cauli_VI|PF01693.12|1.7e+03 S_Transcript_101988:154-936(+)
MKRRLFFVVRKGDVVGVYKSLSECQAQVGSSISDPPASVYKGYSLPKDAEEYLTSCGLQNALYTIKASDLKDDLFGTLEPCPFQEPSSSKGQTSSVNLPQKRPHDVLESDYVHSCILEFDGASKGNPGQAGAGAVLRTLNGSLICSIRQGLGIATNNVAEYRAVILGLRKALDMGYTSIQAKGDSKLVCMQMQGLWRVKNQNMSDLHAEAKKLMDRFSSCQISHVLREFNSDADAQANLAISLADGQVQEDLCLPTSAKC*

Click here to download the sequence:
Link to NCBI Protein BLAST