Transcript Information: S_Transcript_102142.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.330650061759
Replicate 20.70199784955729
Replicate 30.83830618561821
Condition 2: 8 Hour
Replicate 11.0662695158566
Replicate 21.220282653076
Replicate 30.77512173109023
Condition 3: 24 Hour
Replicate 10.79435939965797
Replicate 22.0603465069407
Replicate 30.80251959470824


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102142.p2 GENE.S_Transcript_102142~~S_Transcript_102142.p2 ORF type:complete len:220 (+),score=42.96,Myb_DNA-bind_3|PF12776.3|4.2e-18 S_Transcript_102142:439-1098(+)
ATGGCACCAAGTCGAAAAAAGAATAAAGATGGAAGTGAAGGAAGTGAGAGCTTTGGAGGGGATAGGGTTGCTTGGACAAGCGAGTTATTTAATCTCCTATGTGATCTTTGTCTTCAATATGTTGAAAAGAGCGAAGGAAAACGTGGTGAGATTATTTCTCAAAGGCTAGCATGGGGAAATATAGTTGAGAATTTCCAAAAAGAAACAAACTTACCATGGGACAAGCCTAAACTTAAGAACAAGTTAGATAATTATAAAGCTACATGGAGTCTTTGGAAACAACTCAAAGGGAGAGAAACGGGACTAGGATGGAGTAGTGAGAAGGGAACAATCGATGCTAGTAAAGAATGGTGGTCCAATAAGATTAAGGAAAATCCGAAATTCAAGGACTTTGAAGAAAAAGGGATTGATCTTGAACTTGAGTCAAAATTGAATTCTATATACCTTTGTAGTGCTACTGGGCAAGCAAAATACACTCCTGTGGCTGATAATCCACCACAAAGTGATGTTGATGAGCCATATATCCCCTTTTTACCTCATGAGAATAATGAAAGTGTGGGTGGTCATAGCAACTATGAAGTCAATGATTGGGGTGTATGGACAACAAATGCTGATGATAACTCCACTCTTACCTCTAGTATTTATGTTTTAAAAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102142.p2 GENE.S_Transcript_102142~~S_Transcript_102142.p2 ORF type:complete len:220 (+),score=42.96,Myb_DNA-bind_3|PF12776.3|4.2e-18 S_Transcript_102142:439-1098(+)
MAPSRKKNKDGSEGSESFGGDRVAWTSELFNLLCDLCLQYVEKSEGKRGEIISQRLAWGNIVENFQKETNLPWDKPKLKNKLDNYKATWSLWKQLKGRETGLGWSSEKGTIDASKEWWSNKIKENPKFKDFEEKGIDLELESKLNSIYLCSATGQAKYTPVADNPPQSDVDEPYIPFLPHENNESVGGHSNYEVNDWGVWTTNADDNSTLTSSIYVLKT*

Click here to download the sequence:
Link to NCBI Protein BLAST