Transcript Information: S_Transcript_102143.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77702193387388
Replicate 20.64416903817561
Replicate 30.53847404623651
Condition 2: 8 Hour
Replicate 10
Replicate 20.32659633050696
Replicate 30
Condition 3: 24 Hour
Replicate 10.31890340862181
Replicate 20.66171712631671
Replicate 30.55230754171787


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102143.p2 GENE.S_Transcript_102143~~S_Transcript_102143.p2 ORF type:complete len:137 (+),score=17.26,Myb_DNA-bind_3|PF12776.3|3.5e-18 S_Transcript_102143:219-629(+)
ATGGCACCAAGTCGAAAAAAGAATAAAGATGGAAGTGAAGGAAGTGAGAGCTTTGGAGGGGATAGGGTTGCTTGGACAAGCGAGTTATTTAATCTCCTATGTGATCTTTGTCTTCAATATGTTGAAAAGAGCGAAGGAAAACGTGGTGAGATTATTTCTCAAAGGCTAGCATGGGGAAAGATGGTTGAGAATTTTCAAAAACAAACAAACTTACCATGGGACAAGTCTAAACTTAAGAACAAGTTAGATAATTATAAAGCTACATGGAGTCTTTGGAAACAACTCAAAGGGAGAGAAACGGGACTAGGATGGAGTAGTGAGAAGGGAACAATCGATGCTAGTAAAGAATGGTGGTCCAATAAGATTAAGGTTAGTTTATATTTGTTTAATTTATATTCTTTTTTCTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102143.p2 GENE.S_Transcript_102143~~S_Transcript_102143.p2 ORF type:complete len:137 (+),score=17.26,Myb_DNA-bind_3|PF12776.3|3.5e-18 S_Transcript_102143:219-629(+)
MAPSRKKNKDGSEGSESFGGDRVAWTSELFNLLCDLCLQYVEKSEGKRGEIISQRLAWGKMVENFQKQTNLPWDKSKLKNKLDNYKATWSLWKQLKGRETGLGWSSEKGTIDASKEWWSNKIKVSLYLFNLYSFFF*

Click here to download the sequence:
Link to NCBI Protein BLAST