Transcript Information: S_Transcript_102145.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.14122775044459
Replicate 20
Replicate 30.14116455367537
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.1670334066564


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102145.p2 GENE.S_Transcript_102145~~S_Transcript_102145.p2 ORF type:complete len:151 (+),score=18.71,Myb_DNA-bind_3|PF12776.3|4.7e-18 S_Transcript_102145:219-671(+)
ATGGCACCAAGTCGAAAAAAGAATAAAGATGGAAGTGAAGGAAGTGAGAGCTTTGGAGGGGATAGGGTTGCTTGGACAAGCGAGTTATTTAATCTCCTATGTGATCTTTGTCTTCAATATGTTGAAAAGAGCGAAGGAAAACGTGGTGAGATTATTTCTCAAAGGCTAGCATGGGGAAAGATGGTTGAGAATTTTCAAAAACAAACAAACTTACCATGGGACAAGTCTAAACTTAAGAACAAGTTAGATAATTATAAAGCTACATGGAGTCTTTGGAAACAACTCAAAGGGAGAGAAACGGGACTAGGATGGAGTAGTGAGAAGGGAACAATCGATGCTAGTAAAGAATGGTGGTCCAATAAGATTAAGGTATGGATAATCACGATACACAAATTAAGCTATTGCTCCAAATGCAGCAGTTCATGGATGATGAGAATGAGTTTTGGGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102145.p2 GENE.S_Transcript_102145~~S_Transcript_102145.p2 ORF type:complete len:151 (+),score=18.71,Myb_DNA-bind_3|PF12776.3|4.7e-18 S_Transcript_102145:219-671(+)
MAPSRKKNKDGSEGSESFGGDRVAWTSELFNLLCDLCLQYVEKSEGKRGEIISQRLAWGKMVENFQKQTNLPWDKSKLKNKLDNYKATWSLWKQLKGRETGLGWSSEKGTIDASKEWWSNKIKVWIITIHKLSYCSKCSSSWMMRMSFGK*

Click here to download the sequence:
Link to NCBI Protein BLAST