Transcript Information: S_Transcript_10216.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value9E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22811143915869
Replicate 20.3782192495574
Replicate 30.36885472167201
Condition 2: 8 Hour
Replicate 10.3046484331019
Replicate 20.19175870262623
Replicate 30.30451210864259
Condition 3: 24 Hour
Replicate 10.56172557547242
Replicate 20.51802997888794
Replicate 30.79269282416079


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10216.p2 GENE.S_Transcript_10216~~S_Transcript_10216.p2 ORF type:complete len:350 (+),score=50.66,rve|PF00665.22|4.1e-25,gag_pre-integrs|PF13976.2|4.2e-06 S_Transcript_10216:904-1953(+)
ATGCATTTGGGTCATATGGGTGAGAAAGGTATGGCTATTCTTTGTAAACGTGGTTTGCTTGGCTCACTTACTAATTGTGATATTGATTTTTGTGAGTATTGTGTTTATGGTAAGCAAAAGAAAGTAAACTTCTCACCAGGCATACATAGAAACAAGGCAAAACTTGATTATGTCCACTCCGACTTGTGGGGTCCTTCACAAGTTGCCAATGGCGGAGGTAATTGCTATATGATGACTATTATTGATGATTACTCACGAAAAGTCTGGGTATATTTCTTGAAACATAAAAATGAGGCCCTGGGCAAATTCAAAGAGTGGAAAACCTTAATTGAGAATCAGACCGGGAAAAAGCTTAAGAGGTTAAGGACCGATAATGGCCTTGAATTTTGTGATAATGAATTTAAGGAATTTTGCAAGAAGGAAGGTATTGCTAGGCACCTCACTATTGTTGGCAAGCCACAACAAAATGGCGTTGCCGAAAGAATGAACTGTACAATCATGGAGAAGGTTCGTTGTATGCTCTCTACCGCTGGTTTATGGGAACGGCGTCATTTGTGGGGTGAAGCGGCCAATACCGCTTGTTATCTTATCAATCGCTCACCTCATCGTTCACTTGATGGTAAGATTCCCGAAGAGGTTTGGTCCGGTAAGCCAATTGATTTGTCTAATCTTCATGTATTTGGTTGTCCGGCTTATATTCATGTAAATGAGGGAAAACTGTCACCTCGTGCTAGAAAGTGTATCTTTGTAGGCTATGGTAGTGGTGTTAAGGGATTTCGTGTTTATGATCCCGAGACACGTAAGATTTTTCATAGTAGAGATATTACTTTCAATGAGGATGTTACGCCTTCGGGTATTTTGTCTTTTTATTCTAATCCTAGTATAGGAAATGACAAGAGTACTCAAGAGAAGGTGGAGTCTCCCTCTACATCAAGTGATCCTTCCTCTTCTAGTTCCCTTGGTCAACCATCTTCAAGCTCTCCTCCTCCAATTCAACCTTCAATTGCTCATGATCGAGAAAGAAGAGCTCCAAGGCTCCGGAGAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10216.p2 GENE.S_Transcript_10216~~S_Transcript_10216.p2 ORF type:complete len:350 (+),score=50.66,rve|PF00665.22|4.1e-25,gag_pre-integrs|PF13976.2|4.2e-06 S_Transcript_10216:904-1953(+)
MHLGHMGEKGMAILCKRGLLGSLTNCDIDFCEYCVYGKQKKVNFSPGIHRNKAKLDYVHSDLWGPSQVANGGGNCYMMTIIDDYSRKVWVYFLKHKNEALGKFKEWKTLIENQTGKKLKRLRTDNGLEFCDNEFKEFCKKEGIARHLTIVGKPQQNGVAERMNCTIMEKVRCMLSTAGLWERRHLWGEAANTACYLINRSPHRSLDGKIPEEVWSGKPIDLSNLHVFGCPAYIHVNEGKLSPRARKCIFVGYGSGVKGFRVYDPETRKIFHSRDITFNEDVTPSGILSFYSNPSIGNDKSTQEKVESPSTSSDPSSSSSLGQPSSSSPPPIQPSIAHDRERRAPRLRRG*

Click here to download the sequence:
Link to NCBI Protein BLAST