Transcript Information: S_Transcript_10216.p4


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3455526512362
Replicate 21.27141499145
Replicate 32.5007099774374
Condition 2: 8 Hour
Replicate 11.2289207979365
Replicate 23.2609813271466
Replicate 32.3844846473369
Condition 3: 24 Hour
Replicate 13.5544217205035
Replicate 22.2279679176748
Replicate 32.2229598458746


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10216.p4 GENE.S_Transcript_10216~~S_Transcript_10216.p4 ORF type:5prime_partial len:295 (+),score=34.88,UBN2_2|PF14227.2|3.6e-12 S_Transcript_10216:3-887(+)
TTAGTTGATTTGGAGAATTTGGATGTTACCATTGGTGACGAAGATAAGGCCGTTTTGTTGGTTGTGTCCTTGAACCCTATGAAGTATAAACACTTCAAGGAGATCATGTTATATGGCAATAGGACTACCTTAACTTTTCAAGAAGTTAAAAATAACCTATTTTCTAAAGAGAAATTTGATGCCGAACATGATAAAACGGATTCAAGAGATGAGGGTTTGTTTGTTAGAGGTAGACCCTCTAATAAATCAGATAAGAAAAACCGTGGTGGTAGATCAAAGTCTAGGGGTAAGTCCAAAAACCATAAATTTTGCAGGTTTTGTAGAAAACCCGGACATGAGATTGATGAGTGTTTTAAGCTCAAAAATAAACAAGAAAGAGAAGAAAAGGCTAAGGGTAAGAAACCTATAGATTCATCCGCTGAAGCGAGTGTGGTTGATGAACACTCCGATGGTGAGTTATATGTGGCCATAGATTCTGATGATAAGGCTAGGTCACAATGGATTCTTGACTCGGGTTGTACTTTTCATATGTGTCCACATCGTAATTGGTTTGACTCCTATGAGAGGGTTGAAGGTGGCACCGTTTATATGGGTAATAATGCTACTTGTAAGTTTGTTGGGAGAGGGAACGTTAAAATGAAAACTCATGATGGAACCACTTGTACTCTTTCGGGTCTTAGACATGTTCCCAACCTCCGTAGAAATCTTATATCTCTTGGTACCCTCGAATCTTTGGAATGTCACTACTCCGCTCAAGGTGGAGTCCTTAAGGTGTCTAAGGGTTCACTTGTTTTGATGAAAGGCTCTAGAGTTGAGTTTTCATGTGTTACAAGGTTCTACAGTCACCGGTTCCACCGCCACTGCCTCCACATCCAATGCCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10216.p4 GENE.S_Transcript_10216~~S_Transcript_10216.p4 ORF type:5prime_partial len:295 (+),score=34.88,UBN2_2|PF14227.2|3.6e-12 S_Transcript_10216:3-887(+)
LVDLENLDVTIGDEDKAVLLVVSLNPMKYKHFKEIMLYGNRTTLTFQEVKNNLFSKEKFDAEHDKTDSRDEGLFVRGRPSNKSDKKNRGGRSKSRGKSKNHKFCRFCRKPGHEIDECFKLKNKQEREEKAKGKKPIDSSAEASVVDEHSDGELYVAIDSDDKARSQWILDSGCTFHMCPHRNWFDSYERVEGGTVYMGNNATCKFVGRGNVKMKTHDGTTCTLSGLRHVPNLRRNLISLGTLESLECHYSAQGGVLKVSKGSLVLMKGSRVEFSCVTRFYSHRFHRHCLHIQCR*

Click here to download the sequence:
Link to NCBI Protein BLAST