Transcript Information: S_Transcript_102261.p1


Annotated TAIR IDAT1G73400.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27598106-27599812 | Forward length=568
E-Value1.2E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2134746389419
Replicate 25.0654363780009
Replicate 34.4852232312158
Condition 2: 8 Hour
Replicate 13.9531760962032
Replicate 24.4895886725982
Replicate 35.2564590182352
Condition 3: 24 Hour
Replicate 15.0154069238609
Replicate 24.2398286962555
Replicate 34.3323579675454


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102261.p1 GENE.S_Transcript_102261~~S_Transcript_102261.p1 ORF type:3prime_partial len:588 (+),score=115.95,PPR_2|PF13041.2|67,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|4.7e-11,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|7.6e-15,PPR_2|PF13041.2|9.7e-13,PPR_2|PF13041.2|0.25,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|2.2e-11,PPR_1|PF12854.3|16,PPR_1|PF12854.3|2e-10,PPR_1|PF12854.3|2e-07,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|0.31,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|0.78,PPR|PF01535.16|0.0089,PPR|PF01535.16|4.5e-09,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.0033,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|9.6e-05,PPR|PF01535.16|0.9,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|73,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00035,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|1.8e+03 S_Transcript_102261:288-2048(+)
ATGTGGCAATCTTCTATCATTTCAATTCTCAAGCAGTACAGGCATTCATTTAAGCGCCATAATCTTTTCCCACCGTTTATATATCCGCCATCTGGAGCTTTGCTTCATTATTTCCACAAGATTCAAACTCCTTATGCTGGTGAATTTCACCTTCCCTTGAAAGAGTGCTTTATGCTTGGCTTCCCTTCGAGAAAATCTTTGTCCAGCCTAGCTTCAAATGATTTTATGGGTGAGGATTCAAGTAGAAATGTTGCCAAGGAAGAAACATCTATATGTGCCGCAAATGCTGTATATAAAATTGTTATGGATAATGGGGGCTGTGATAAAAACATGGAGAAAGCTCTTGAGCAGTCAGGGATCCCCCTAAGTACCGACTTGGTCATCGGACTCCTCCATAAGCTGCGTTTTGAGGAGAAAATAGCATTTAGGTTTTTCATGTGGGCTGGCCACCAGGAGCAATATGACCATGAATACGAGGCTTATAACGAGATGATCGATATATTATCTAGTACAAAATTCAAACTTAAGCAATTCAAAATTGTTTGTGATATGTTAGAATTCATGAAAAGGAATAGGAAAAAGTCAGTCCCTGTTGATGTTCTCTTGACTATCTTGAAAAAATATACAGAAAAACATCTGACTGAGATGAAGAAATGCTCGAAGAAGAAGAAAAGAATTAGGATAAAAATTCAACCAGAGGTCAATGCACTCAACTTGCTACTTGAAGCTCTTTGCAAGTGTTGTCTGGTTGAGACTGCAGAAATATTGTTTAAGAAGGTGAAGAACAAGGTTGAGCCAGATGTGAATACCTTCAACATATTACTTTTTGGGTGGTGTAGGATCAGAAACCCAATTAGAGGAATGAAGATCCTGGAAGAAATGTCCAGTATGGGCTTTACTCCAGATAGTTTTACGTACAATGCTGCAATCAGCAGCTTTTGTAAAGCAGGACTGGTGAATGAGGCTTATGAGCTTTTCAAGCTCATGAGAGCAAAAGGTTGTATCTCATCTTCTCCCACTGCAAAAACATATGCGATAATGATTTTGGCTTTTGTTGAGAATGATAGAATGGAGGATTGCTTTAAAGTTGTTGGGGATATGGTAGAAAGTGGTTGTCTTCCTGATGTTTGCACTTACAAGGAGTTACTCGAAGGAATGTGCTTGGCTGGAAAAGTGGAGGAAGCTTATAGGTTTTTGGAGGAGATGGCAAAGAGAGACTTCCCCCCTGATATTGTCACATACAACTGTTTTCTTAAGGTTCTTTGTGACAATAAGATGGTTAGTGAAGCAATTCGGCTTTATGAGAAAATGATTGAGTTAGGTTGTATGCCTAGTGTGCATACTTTTAATATGCTGATTGAGATGTTCTTTGCCATGGGTGACCCCGATGGAGCATTTGAGACTTGGGATGAAATGGATAAGAAAGGTTGTTATCGTGATACCAATACTTATTGTGTGATGATTGAAGGTCTTTTTGGTTGTGACAAAATAGAGGATGCGTGTTTTCTTTTGGAAGATGTTGTGAGCAAGGGAATGAAACTACCCTACAAAAAATTTGATTTATTTCTGACGCACCTGTCAACTATTGGCAATCTCCGTGCAATTCACAGTCTTTCAGAGCACATGAGAAGGTTCTACAATCCTGGCATGGCAAGACGCTTTGCACTGAGTCAAAAGAGAGAGCATGAGCTTGAGGGAGAACTAAACTATGTGGCAAATTTTGTCAGATATAAGCAGGATAATGCCAATCATTCAGGGCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102261.p1 GENE.S_Transcript_102261~~S_Transcript_102261.p1 ORF type:3prime_partial len:588 (+),score=115.95,PPR_2|PF13041.2|67,PPR_2|PF13041.2|3.6e-07,PPR_2|PF13041.2|4.7e-11,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|2.8e-10,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|7.6e-15,PPR_2|PF13041.2|9.7e-13,PPR_2|PF13041.2|0.25,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.00012,PPR_1|PF12854.3|2.2e-11,PPR_1|PF12854.3|16,PPR_1|PF12854.3|2e-10,PPR_1|PF12854.3|2e-07,PPR_1|PF12854.3|2.6e-05,PPR_1|PF12854.3|0.31,PPR|PF01535.16|2.9e+03,PPR|PF01535.16|0.78,PPR|PF01535.16|0.0089,PPR|PF01535.16|4.5e-09,PPR|PF01535.16|0.0019,PPR|PF01535.16|0.0033,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|9.6e-05,PPR|PF01535.16|0.9,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|73,PPR_3|PF13812.2|8.4,PPR_3|PF13812.2|0.00035,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|8.3,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|3.8e-05,PPR_3|PF13812.2|5.6e+02,PPR_3|PF13812.2|1.8e+03 S_Transcript_102261:288-2048(+)
MWQSSIISILKQYRHSFKRHNLFPPFIYPPSGALLHYFHKIQTPYAGEFHLPLKECFMLGFPSRKSLSSLASNDFMGEDSSRNVAKEETSICAANAVYKIVMDNGGCDKNMEKALEQSGIPLSTDLVIGLLHKLRFEEKIAFRFFMWAGHQEQYDHEYEAYNEMIDILSSTKFKLKQFKIVCDMLEFMKRNRKKSVPVDVLLTILKKYTEKHLTEMKKCSKKKKRIRIKIQPEVNALNLLLEALCKCCLVETAEILFKKVKNKVEPDVNTFNILLFGWCRIRNPIRGMKILEEMSSMGFTPDSFTYNAAISSFCKAGLVNEAYELFKLMRAKGCISSSPTAKTYAIMILAFVENDRMEDCFKVVGDMVESGCLPDVCTYKELLEGMCLAGKVEEAYRFLEEMAKRDFPPDIVTYNCFLKVLCDNKMVSEAIRLYEKMIELGCMPSVHTFNMLIEMFFAMGDPDGAFETWDEMDKKGCYRDTNTYCVMIEGLFGCDKIEDACFLLEDVVSKGMKLPYKKFDLFLTHLSTIGNLRAIHSLSEHMRRFYNPGMARRFALSQKREHELEGELNYVANFVRYKQDNANHSGH

Click here to download the sequence:
Link to NCBI Protein BLAST