Transcript Information: S_Transcript_102285.p1


Annotated TAIR IDAT4G26470.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13371377-13372343 | Forward length=231
E-Value3.9E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.030234784775
Replicate 226.571972824744
Replicate 323.22169324395
Condition 2: 8 Hour
Replicate 132.143745259036
Replicate 232.741282133322
Replicate 330.729050379444
Condition 3: 24 Hour
Replicate 132.847051088047
Replicate 225.889682567141
Replicate 324.853839377304


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102285.p1 GENE.S_Transcript_102285~~S_Transcript_102285.p1 ORF type:5prime_partial len:274 (-),score=64.26,EF-hand_1|PF00036.28|2.2e-06,EF-hand_1|PF00036.28|16,EF-hand_1|PF00036.28|0.00012,EF-hand_1|PF00036.28|0.00042,EF-hand_6|PF13405.2|0.00014,EF-hand_6|PF13405.2|18,EF-hand_6|PF13405.2|0.0001,EF-hand_6|PF13405.2|0.11,EF-hand_7|PF13499.2|1.9e-06,EF-hand_7|PF13499.2|1.3e-07,EF-hand_8|PF13833.2|0.19,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|4.9,EF-hand_8|PF13833.2|0.015,EF-hand_5|PF13202.2|0.024,EF-hand_5|PF13202.2|1.7e+02,EF-hand_5|PF13202.2|0.00018,EF-hand_5|PF13202.2|8,SPARC_Ca_bdg|PF10591.5|0.0021,SPARC_Ca_bdg|PF10591.5|0.057 S_Transcript_102285:313-1134(-)
CCCCCACCCACACCCCCCCCACCCCCCCCCCCCCACCTCCCCCCCCCCCACACCCCCCCCCTTCCCCCCCCCCCCCGTAATTGTAATTCTTGTTTGTTCTTTGTGTGTTGTATATTCGTCAAGCTGCAAATGGGAGGTGCGCTTGGAGTTGAATCCCCTAAGAGGGGTTATTTACCTGAAACAAAGCTTGAAGCCAAAATGGTTGAAGCTATGCAGAAGAGAGCTTCTAAAGGATCAGCTATGAAATCCTTTAACACCATTATCCTGAAATTTCCAAAAATTGATGAGAGCTTCAGAAAATGCAAAGTAATTTTTGAAGAATTTGATGAGGATAAAAATGGGGCAATAGATCATGGTGAGCTGAAACACTGCTTCCGCAAGTTGGAAGTTTCCTTCACAGAGGAAGATATTAATGATCTCTTCAAGGCATGTGATATCAATGAGGACATGGGAATGAAGTTCAATGAATTCATCGTACTTCTGTGTCTTGTGTATCTTCTTCAGGAGGATCCAGCGTCTACTGAAGTTAAATCTCAGATGCGGTTGCCAAATCTGGAGGCAACATTTGAAACATTGGTTGATGCATTTGCATTTTTGGACAAAAACAAGGATGGGTATGTCAGCAGGACTGAGATGATTCAGGCAATAAATGAAACTACTAGCGGTGAACGTTCTTCAGGAAGGATAGCAATGAGAAGATTTGAAGAGATGGACTGGGATAAAAATGGAATGGTGAATTTTAAAGAATTTCTATTTGCTTTCACTCGTTGGGTTGGTATCGATGAAGCTGAAGATGAGGATGAGGAAGGAGAAGCTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102285.p1 GENE.S_Transcript_102285~~S_Transcript_102285.p1 ORF type:5prime_partial len:274 (-),score=64.26,EF-hand_1|PF00036.28|2.2e-06,EF-hand_1|PF00036.28|16,EF-hand_1|PF00036.28|0.00012,EF-hand_1|PF00036.28|0.00042,EF-hand_6|PF13405.2|0.00014,EF-hand_6|PF13405.2|18,EF-hand_6|PF13405.2|0.0001,EF-hand_6|PF13405.2|0.11,EF-hand_7|PF13499.2|1.9e-06,EF-hand_7|PF13499.2|1.3e-07,EF-hand_8|PF13833.2|0.19,EF-hand_8|PF13833.2|0.0011,EF-hand_8|PF13833.2|4.9,EF-hand_8|PF13833.2|0.015,EF-hand_5|PF13202.2|0.024,EF-hand_5|PF13202.2|1.7e+02,EF-hand_5|PF13202.2|0.00018,EF-hand_5|PF13202.2|8,SPARC_Ca_bdg|PF10591.5|0.0021,SPARC_Ca_bdg|PF10591.5|0.057 S_Transcript_102285:313-1134(-)
PPPTPPPPPPPHLPPPHTPPLPPPPRNCNSCLFFVCCIFVKLQMGGALGVESPKRGYLPETKLEAKMVEAMQKRASKGSAMKSFNTIILKFPKIDESFRKCKVIFEEFDEDKNGAIDHGELKHCFRKLEVSFTEEDINDLFKACDINEDMGMKFNEFIVLLCLVYLLQEDPASTEVKSQMRLPNLEATFETLVDAFAFLDKNKDGYVSRTEMIQAINETTSGERSSGRIAMRRFEEMDWDKNGMVNFKEFLFAFTRWVGIDEAEDEDEEGEAA*

Click here to download the sequence:
Link to NCBI Protein BLAST