Transcript Information: S_Transcript_102317.p1


Annotated TAIR IDAT4G12740.1
Annotated Gene NameHhH-GPD base excision DNA repair family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7494578-7497596 | Reverse length=630
E-Value1.5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5785808576655
Replicate 21.6606400742215
Replicate 32.8754803571205
Condition 2: 8 Hour
Replicate 11.490484269477
Replicate 22.7664113909339
Replicate 32.4066279554011
Condition 3: 24 Hour
Replicate 11.4093473219738
Replicate 21.7058782906928
Replicate 34.3392764567942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102317.p1 GENE.S_Transcript_102317~~S_Transcript_102317.p1 ORF type:5prime_partial len:186 (+),score=53.18,HhH-GPD|PF00730.21|4.4e-18,HHH|PF00633.19|2.9e+03,HHH|PF00633.19|4.1e-06 S_Transcript_102317:3-560(+)
TTATTGAAGTTCAATGAAGAAGAAATTGCTGAAATTAGGGCATCTCTGTTAGACTGGTATGATAAGAATAAAAGGGTCTTGCCTTGGAGAAGATTGGCTTCAAATTCTGATAAACAACAAGAAGAAGATGAAAATGAAGGAGAGAGAAGGGCTTATGGGGTTTGGGTTTCGGAAGTGATGCTTCAACAAACTAGGGTTTCTACTGTTATTGATTATTATAACAAGTGGATGAACAAATGGCCTTCTGTTCTTCATCTCTCTCAAGCTTCCCTTGAGGAGGTAAACCAAACATGGGCAGGATTGGGATATTATAGAAGGGCCAGGTTTTTGTTTGAGGGGGCAAAAAAGATTGTTGAGGAAGGAGGCAGATTCCCTAGAACAGTTTCTGCTCTGAGGAAGATTCCTGGGATCGGGGATTACACTGCAGGTGCCATTGCCTCCATTGCATTCCAGGAGGCTGTGCCAGTGGTAGATGGAAATGTGGTTAGGGTGCTTGCCAGATTAAAGGCTATATCTGCTAATCCAAAGAACACTGTGACCGTCAAAAAGTTTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102317.p1 GENE.S_Transcript_102317~~S_Transcript_102317.p1 ORF type:5prime_partial len:186 (+),score=53.18,HhH-GPD|PF00730.21|4.4e-18,HHH|PF00633.19|2.9e+03,HHH|PF00633.19|4.1e-06 S_Transcript_102317:3-560(+)
LLKFNEEEIAEIRASLLDWYDKNKRVLPWRRLASNSDKQQEEDENEGERRAYGVWVSEVMLQQTRVSTVIDYYNKWMNKWPSVLHLSQASLEEVNQTWAGLGYYRRARFLFEGAKKIVEEGGRFPRTVSALRKIPGIGDYTAGAIASIAFQEAVPVVDGNVVRVLARLKAISANPKNTVTVKKFW*

Click here to download the sequence:
Link to NCBI Protein BLAST