Transcript Information: S_Transcript_102472.p1


Annotated TAIR IDAT1G04880.1
Annotated Gene NameHMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1376106-1378264 | Reverse length=448
E-Value1.3E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60484093716319
Replicate 20.25071351769903
Replicate 31.4670358248319
Condition 2: 8 Hour
Replicate 12.6656737896416
Replicate 22.5422555272417
Replicate 30.96890216386279
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 21.2877165668379
Replicate 31.4330707048361


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102472.p1 GENE.S_Transcript_102472~~S_Transcript_102472.p1 ORF type:5prime_partial len:88 (+),score=7.95 S_Transcript_102472:2-265(+)
ATACCATCTGACATTCAGAATATTGATGCACTAACAGAATTAGAAAAGACATGCAAAGATGTTACAGCCACTTTCAACTTTCCATCCACAGCGACAAATGCCTCATTTGTGTTGCGCAAGTACTATTATTCACTGCTCCAGCATTATGAGCATCTACTACTTCAAAGCCCAGGCTTGGAATCCATCTACTGGTATGTCTCAACATATCTCAATCCTTATTGTTGTTGTGGTCCTGTTACAGCCAAGTCATTTTTTTTGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102472.p1 GENE.S_Transcript_102472~~S_Transcript_102472.p1 ORF type:5prime_partial len:88 (+),score=7.95 S_Transcript_102472:2-265(+)
IPSDIQNIDALTELEKTCKDVTATFNFPSTATNASFVLRKYYYSLLQHYEHLLLQSPGLESIYWYVSTYLNPYCCCGPVTAKSFFLT*

Click here to download the sequence:
Link to NCBI Protein BLAST