Transcript Information: S_Transcript_102503.p1


Annotated TAIR IDAT1G25540.1
Annotated Gene Namephytochrome and flowering time regulatory protein (PFT1)
Annotated Gene Symbol(s)PFT1
Annotation TypeOrtholog
Chromosome Positionchr1:8969392-8974446 | Reverse length=836
E-Value2.5E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.974040600718
Replicate 215.906935026813
Replicate 316.302254404496
Condition 2: 8 Hour
Replicate 119.275352795439
Replicate 218.201715071478
Replicate 318.2171780821
Condition 3: 24 Hour
Replicate 118.59247996972
Replicate 217.72187845419
Replicate 317.386356518415


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102503.p1 GENE.S_Transcript_102503~~S_Transcript_102503.p1 ORF type:complete len:853 (+),score=207.12,Med25_VWA|PF11265.4|3.8e-42 S_Transcript_102503:222-2780(+)
ATGGCGGATAAACAGTTGATTGTTGTCGTTGAAGGCACTGCTGCGATGGGCTCTTATTGGAACACCATTGTTTCCGATTACCTTGAAAAGATCGTCAGGTCCTTTTGTGGAAATGAATCGCCCTGTCAGACACAGAAGCCTTCTGCTTCAGCTGCTTCTGGTTCAACTTTTGAGCTTGCTCTGGTGATGTTCAATACGCACGGACCTTTTTCTGCTTGCACTGTTCAACGAAGTGGTTGGACCAGAGATATAGACAATTTTTTGGGGTGGCTTACTTCCCTAACATTTTCGGGTGGTGGTCTGAATGATGTTGCAACCGCAGATGGCCTCTCTGAGGCTTTAATGATGTTTGCTATCCCACAAAATGGATTCCAGACCCAACAAAATTTGGATGGAAAAAGGCATTGCATTCTTATTTCTGCTAGCAACCCTTACCCCTTGCCAACACCAGTCTATCGACCAGCAATTGTAGATTCGGATCACGGTGCAAATGGTGAAGCACAAATCGATAATCTTCTATTTGATTCTGAGACAGTGGCTAAATGGTTCGGTCAGTGTTCTGTTTCTCTGTCAGTTATTTGTCCAAAACAGCTCATGAAGCTTAAGGCAATATATAATGCGGGTAAGCGCAACCAGAGAGCAGCTGATCCTTCTGTCGATGTAAAGCAGCCTCACTTTCTTGTTCTTATATCAGACAGCTTCATGGAGGCCCGTGCTGCTTTAAGTCGGACAGGTTTGGCACCAAGTCAGAACCCTGCAACTTTACCTCCTGGTTCAGGCCCTCCTACTACTTTGCCAGCAGCGAATGGGTCTATCATGAATAGACCTCCAATATCTACTGGAATTGTTCCTCAAGCGACTGTGAAAGTTGAGCCAAGTACAGTGACTTCTGTGCCACCAGGACCAACTCTTCCTCATATGCCTTCTATGGCTCGTGCTGCTGTTCAAAGTGTGCCCAGCTTACAGGCATCTTCACCTCCTTCTGTGTCTCAGGAGTTGGCTACAAATAATGAGAATATACCAGAGATGAAGCCCATGGTTAGCATGTCGCAGCCTTTGCGCCCTGTAGGTGCCATACTGAACAATCTGTCTCAGGCACGGGTAATGAACTCTGCAGCCCTCACAGGAGGAACTTCTCTAGGTTTGCCTTCAATGGGTTCAAATCCTATTGGTATGCACATGTCAAACATGATATCTAGTGGAATGGCATCTAGTGTACCGCCTTCTCAAACTGTATTGTCTTCTGCACAATCTGGCAACACTGCTGTATCTGGGTCTGGGACCATCCCTGGAACTTCACAGCCGGTACAAAACCCTGCTGTCAATTCATTTTCTTCTGCAACTTCTAATGTTTCTGGGAATTCCAACCTAGCCATATCTCAGCCACTGAATAATGTTCAAGGGAATGTGAGTAGTACTGTGGGTCATTTAGTATCTGCCATTGGTCAGGGAAGTGTCCAGTCAGTGACACAGAGTGTGAATAGTATGAATCCAAACATGATGTCTAACCTTGGGTCCACTGTTGTACCCTCTGGTACTGGTGCTATGATGCCGACACCTGGGATGCAAAGTGTTGGAGTGAACAATACAGCAGCTAATATGCCAATGTCACAGCAAGCTTCGGCTTCATTACCATCATCGCAATCAAAATATGTGAAAGTATGGGAGGGAAATTTATCCGGACAGAGACAAAGGCAACCTGTATTTATCACTAGATTGGAGGGATATAGGAATGCATCTGCTTCAGAAACGCTTGCAGCAAATTGGCCAGCAACCATGCAAATAGTTCGTCTTATATCTCAGGATCACATGAATAACAAGCAATATGTTGGGAAAGCAGATTTTCTTGTTTTCAGGGCTATGAATCAGCACGGGTTTCTGGCACAGCTACAAGAAAAGAAGCTATGTGCAGTAATCCAGTTGCCATCTCAGACACTGCTGCTGTCTGTTTCAGATAAAGCCTGCCGCTTGATAGGAATGCTTTTTCCTGGGGACATGGTTGTTTTCAAACCGCAAATACCAAACCAGCCACAACAACAGTTGCAGCACCAGCAACAACAAAATCAGCAGCCACAGCAGCAACAACAACAGCCGCATCCTCAGCTGCAACAACAGCAGATTCAGCATTTGCAACAACAACAGCAAACGATGCAACAGCTGCAGCAACAGCCGCCACAAATGCAGCAACAGCTTCAGCATTTACCTCAACAGCAACAGACATTGCAACAGCCACAGATGCAGCAGCAACAACTTCAGCATCTACCTCAACAGCAACCGAATATGCAACAGCAGCTGCAGCAACATCAGCAGCACCAACAACAGCAGATCCCACAACTTCAGCAACAGCAAATCCCACAACTTAAACAACAGCAACAAATTCCGCAGCTTCAACAGCAGCAACAAATACCGCAATTGCAACAGCAGCCACAGCAGATGGTTGGATCGGGAATGGGTCAGGGGTATATGCAAGGTCCAGGTCGGCCACAGTTGGTCCCACAAGGACAAGTCCCGTCACAAGGGACTCCACCCAATATACCTGGAGGTGGGTTTATGGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102503.p1 GENE.S_Transcript_102503~~S_Transcript_102503.p1 ORF type:complete len:853 (+),score=207.12,Med25_VWA|PF11265.4|3.8e-42 S_Transcript_102503:222-2780(+)
MADKQLIVVVEGTAAMGSYWNTIVSDYLEKIVRSFCGNESPCQTQKPSASAASGSTFELALVMFNTHGPFSACTVQRSGWTRDIDNFLGWLTSLTFSGGGLNDVATADGLSEALMMFAIPQNGFQTQQNLDGKRHCILISASNPYPLPTPVYRPAIVDSDHGANGEAQIDNLLFDSETVAKWFGQCSVSLSVICPKQLMKLKAIYNAGKRNQRAADPSVDVKQPHFLVLISDSFMEARAALSRTGLAPSQNPATLPPGSGPPTTLPAANGSIMNRPPISTGIVPQATVKVEPSTVTSVPPGPTLPHMPSMARAAVQSVPSLQASSPPSVSQELATNNENIPEMKPMVSMSQPLRPVGAILNNLSQARVMNSAALTGGTSLGLPSMGSNPIGMHMSNMISSGMASSVPPSQTVLSSAQSGNTAVSGSGTIPGTSQPVQNPAVNSFSSATSNVSGNSNLAISQPLNNVQGNVSSTVGHLVSAIGQGSVQSVTQSVNSMNPNMMSNLGSTVVPSGTGAMMPTPGMQSVGVNNTAANMPMSQQASASLPSSQSKYVKVWEGNLSGQRQRQPVFITRLEGYRNASASETLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLAQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQIPNQPQQQLQHQQQQNQQPQQQQQQPHPQLQQQQIQHLQQQQQTMQQLQQQPPQMQQQLQHLPQQQQTLQQPQMQQQQLQHLPQQQPNMQQQLQQHQQHQQQQIPQLQQQQIPQLKQQQQIPQLQQQQQIPQLQQQPQQMVGSGMGQGYMQGPGRPQLVPQGQVPSQGTPPNIPGGGFMG*

Click here to download the sequence:
Link to NCBI Protein BLAST