Transcript Information: S_Transcript_102572.p1


Annotated TAIR IDAT1G05310.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1550615-1552434 | Reverse length=393
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9415072525054
Replicate 24.0020874081073
Replicate 35.0610299020113
Condition 2: 8 Hour
Replicate 18.6293439887933
Replicate 29.4690150056517
Replicate 38.4271955647601
Condition 3: 24 Hour
Replicate 15.5882260092218
Replicate 210.225068478631
Replicate 36.1002153910048


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102572.p1 GENE.S_Transcript_102572~~S_Transcript_102572.p1 ORF type:complete len:215 (+),score=30.77 S_Transcript_102572:351-995(+)
ATGATGGGGACTCGAAGAAAAGCTGAACATGGAGTGATTCAATCCTCGATTGCTCTCTTACAAGAGCGATTCAAGCAGCTACAACAAGTGAAGGAGATGAGGGAGAAACGAGAACATCTTCGAATGTTCTCCGATTACAAAAATAATAATACCACTACCACTACTACGACTACTACTATTAGTAGTACTAGTACAACTACCAATAGTAATAATAACAACAATTTTCCTAGTGATCATTCTACCATGCAATATACAGATAAGCCTCCTTATGATGATGGTGATGATGAGCTACAAATTTTCCTCCCACCTAATTATTACCATCATCATCATCACAAGCCTAAGGCTTCATCTTATTCATCATCATCATTATCATCATCATCATCATCATCACCGCCATCAACATCCCCATCATCAAATTATCAGAATTATTGTTGTAACGATGTTTCGCTATCACTTTGGCCTCCCACGTCATGCGATAATAACAACGTTAACTTACGACCACGATCAAGCTTGGAAGTCCCGATTTCTACAAGGAGCTTCTTACGGCCACCAACGATGGAAATCAGCAGATCATCACCTACTTGTGCTTTTAAGTTGGAGGATTATTCTCATGTCTCAGATGTTGATACTACCCTTCATCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102572.p1 GENE.S_Transcript_102572~~S_Transcript_102572.p1 ORF type:complete len:215 (+),score=30.77 S_Transcript_102572:351-995(+)
MMGTRRKAEHGVIQSSIALLQERFKQLQQVKEMREKREHLRMFSDYKNNNTTTTTTTTTISSTSTTTNSNNNNNFPSDHSTMQYTDKPPYDDGDDELQIFLPPNYYHHHHHKPKASSYSSSSLSSSSSSSPPSTSPSSNYQNYCCNDVSLSLWPPTSCDNNNVNLRPRSSLEVPISTRSFLRPPTMEISRSSPTCAFKLEDYSHVSDVDTTLHL*

Click here to download the sequence:
Link to NCBI Protein BLAST