Transcript Information: S_Transcript_102624.p1


Annotated TAIR IDAT1G53800.2
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20081888-20084320 | Forward length=572
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7843597726167
Replicate 26.1974127970547
Replicate 35.180543843708
Condition 2: 8 Hour
Replicate 13.3545557802232
Replicate 24.021905373434
Replicate 32.8740468680874
Condition 3: 24 Hour
Replicate 13.9271700657248
Replicate 27.3848374799334
Replicate 33.967512603052


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102624.p1 GENE.S_Transcript_102624~~S_Transcript_102624.p1 ORF type:5prime_partial len:89 (+),score=16.38 S_Transcript_102624:2-268(+)
GGTAGCAAGAGAGCACCAAAGTCTGCTGAACAACGGAGAAAAATTGCAGAGGCCATTGCTGCTAAATGGGCTGACCCCGTAAGTTTTTATCGCATCAGAGCAAAGCAGCGTTTCTTCCTTAATATACATGAAAAGAAAATTTTGCTTCCTTATAGTCATAATCTCTTTGAACATAGTTATGCCTTTAAGACAGGTACCAAGATGCATAAATCCTTTGGCAGTAAAGTTCTGAAGTTGGGAGGGGAGGAGCTCTGGAGGTGCCCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102624.p1 GENE.S_Transcript_102624~~S_Transcript_102624.p1 ORF type:5prime_partial len:89 (+),score=16.38 S_Transcript_102624:2-268(+)
GSKRAPKSAEQRRKIAEAIAAKWADPVSFYRIRAKQRFFLNIHEKKILLPYSHNLFEHSYAFKTGTKMHKSFGSKVLKLGGEELWRCP*

Click here to download the sequence:
Link to NCBI Protein BLAST