Transcript Information: S_Transcript_102652.p1


Annotated TAIR IDAT3G47520.1
Annotated Gene Namemalate dehydrogenase
Annotated Gene Symbol(s)MDH
Annotation TypeOrtholog
Chromosome Positionchr3:17513657-17514868 | Forward length=403
E-Value7.3E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.869512090459
Replicate 219.191968747621
Replicate 315.287472801828
Condition 2: 8 Hour
Replicate 123.791941486344
Replicate 221.509319535544
Replicate 325.270836196749
Condition 3: 24 Hour
Replicate 18.0010175676393
Replicate 211.523046367733
Replicate 316.044866802291


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102652.p1 GENE.S_Transcript_102652~~S_Transcript_102652.p1 ORF type:complete len:415 (+),score=117.17,Ldh_1_N|PF00056.19|1.3e-48,Ldh_1_C|PF02866.14|9.3e+03,Ldh_1_C|PF02866.14|2.7e-46 S_Transcript_102652:85-1329(+)
ATGGCCGCAACAGCAGCTGCAAATATATCCGTTTCATCATCTGCATCTTGCAATGCCAAGGTGTACACAGTTCCAAACACAAAGCCATCGAGTCTATGGTTAAAATCGACCCAGGATTTCAGGAATTTCAGTGGTCTTAAATCAGCTGCATGTGTGAGCTATGAATCTGAGACATCATTCCTGGGGAAAGATGGTCTTGTTTCCCTGCAAAATTCTTTCAGAAGAAGTGCTGTGAAGGAAAACAATGAATTTGTCACGTGTCTGCAGCCTAAGGCTTCTGCATCCTCAAAAGTGGCTATTCTTGGAGCAGCTGGAGGGATTGGTCAACCATTGGCACTTCTTGTTAAGATGTCACCACTAGTCTCTGACCTCCACCTTTATGATATAGCTAATGTCAAGGGAGTTGCTGCTGACCTAAGCCACTGCAATACTCCATCCCAGGTTTCACATTTTACTGGCCCTGAACAGTTAGCTGATGCTCTCAAGGGCATAGATGTTGTTGTCATCCCTGCTGGGGTTCCGAGAAAACCTGGAATGACAAGAGATGATCTCTTCAACATTAATGCTGGCATTGTGAAGACTTTGATTGAAGCTGTTGCTGATAACTGTCCGGATGCATTTATTCACATAATCAGCAATCCAGTCAATTCCACTGTACCCATTGCTGCTGAGGTGCTGAAACAAAAGGGTGTTTATAATCCCAAGAAACTCTTTGGTGTTACTACTCTGGATGTTGTTAGGGCAAACACATTTGTTGCCCAGAAGAAGAACCTGAAACTCATTGATGTAGATGTGCCAGTGATCGGGGGACATGCTGGTATAACCATTTTGCCACTGCTGTCTAAAACAAAACCTTCTGTGACCTTCACTGATGAGGAGGTGCAAGAGCTGACTGTGAGAATTCAGAATGCTGGGACAGAGGTCGTGGAAGCAAAAGCTGGGGCTGGTTCTGCAACACTTTCTATGGCATATGCTGCTGCTAGATTTGTCGAATCATCTCTGCGTGCTCTTGATGGGGACTCAGACGTGTATGAGTGTTCATTTGTGCAGTCAGAATTGACTGAGCTCCCTTTCTTTGCATCGAGAATTAAGCTGGGAAGGAAGGGTATCGAGGCCTTTGTGAATTCCGGCTTGCAAGGACTCACTGACTACGAATCCAAGGCTCTTGAAGCTCTTAAGCCCGAGCTGAAGACCAGCATTGAGAAGGGTATTGCTTTTGCAAACAAGCAACCAGTTAGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102652.p1 GENE.S_Transcript_102652~~S_Transcript_102652.p1 ORF type:complete len:415 (+),score=117.17,Ldh_1_N|PF00056.19|1.3e-48,Ldh_1_C|PF02866.14|9.3e+03,Ldh_1_C|PF02866.14|2.7e-46 S_Transcript_102652:85-1329(+)
MAATAAANISVSSSASCNAKVYTVPNTKPSSLWLKSTQDFRNFSGLKSAACVSYESETSFLGKDGLVSLQNSFRRSAVKENNEFVTCLQPKASASSKVAILGAAGGIGQPLALLVKMSPLVSDLHLYDIANVKGVAADLSHCNTPSQVSHFTGPEQLADALKGIDVVVIPAGVPRKPGMTRDDLFNINAGIVKTLIEAVADNCPDAFIHIISNPVNSTVPIAAEVLKQKGVYNPKKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVIGGHAGITILPLLSKTKPSVTFTDEEVQELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDSDVYECSFVQSELTELPFFASRIKLGRKGIEAFVNSGLQGLTDYESKALEALKPELKTSIEKGIAFANKQPVSA*

Click here to download the sequence:
Link to NCBI Protein BLAST