Transcript Information: S_Transcript_102871.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeHomolog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value5E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6814272299823
Replicate 26.1974127970547
Replicate 35.9058199818272
Condition 2: 8 Hour
Replicate 15.0318336703348
Replicate 26.6612807747501
Replicate 312.933210906393
Condition 3: 24 Hour
Replicate 14.5407903884943
Replicate 26.2389144227024
Replicate 33.967512603052


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102871.p1 GENE.S_Transcript_102871~~S_Transcript_102871.p1 ORF type:complete len:178 (+),score=29.22 S_Transcript_102871:816-1349(+)
ATGAATGGCCAAAATGCCAAGACTAATTTCCCAAGAGATCATCACAAGAGTACTAATAACCAACTAAGTAACAATGGTACTCTAAGGGCTAATAGTACTACCAATGATCAAGATACAATGGCTCCATTTAATGCAGCATTGTCCGAGATACTTAGTGCCAAGCTCAAGAGATATTGCAAGGATCCTTCCCCTTCCCTTACTTGTCTCCGTCTCGACACCGATAACTCTCACATTGGTGTGTGGCAAAAACGAGCCGGTACGTGCTCCGGATCAAATTGGGTCATGAGGGTTGAGCTTGGCAAGGCAAGTACTATGGCTAAACAAAATGTCACAATTAACAACAATGATGGTTCGTCTCCTAAATCGAACCTATCATCATCATCATCGTCGTCCTCTTCTTCTTCTTTTTCTTCTTCTTCTTCGCCTTTCTCAATCTCGCCACCAGATGGGGCGATGAGTGAGGAAGACAAAGCTGCATTGCAAATGATAGAGGAATTGCTTAATTGGAACACCCCTAGTACTCCATTTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102871.p1 GENE.S_Transcript_102871~~S_Transcript_102871.p1 ORF type:complete len:178 (+),score=29.22 S_Transcript_102871:816-1349(+)
MNGQNAKTNFPRDHHKSTNNQLSNNGTLRANSTTNDQDTMAPFNAALSEILSAKLKRYCKDPSPSLTCLRLDTDNSHIGVWQKRAGTCSGSNWVMRVELGKASTMAKQNVTINNNDGSSPKSNLSSSSSSSSSSSFSSSSSPFSISPPDGAMSEEDKAALQMIEELLNWNTPSTPFN*

Click here to download the sequence:
Link to NCBI Protein BLAST