Transcript Information: S_Transcript_102874.p1


Annotated TAIR IDAT1G15360.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)SHN1, WIN1
Annotation TypeOrtholog
Chromosome Positionchr1:5283609-5284506 | Forward length=199
E-Value5.7E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8178709132654
Replicate 25.2304026968246
Replicate 34.5311894688157
Condition 2: 8 Hour
Replicate 15.7909465085318
Replicate 27.4251394192196
Replicate 37.9015641983983
Condition 3: 24 Hour
Replicate 14.0488361642049
Replicate 25.1775086790794
Replicate 36.0880796839935


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102874.p1 GENE.S_Transcript_102874~~S_Transcript_102874.p1 ORF type:complete len:232 (+),score=40.02,AP2|PF00847.16|1.3e-11 S_Transcript_102874:283-978(+)
ATGGTACTTCCTTCTAAGAAGTTCAGAGGCGTCAGGCAACGCCAGTGGGGCTCTTGGGTTTCAGAAATCCGCCATCCTTTATTGAAGAAAAGGGTATGGCTAGGGACATTTGAGACAGCAGAGGAAGCTGCAAGAGCATATGACCAAGCAGCCATATTGATGAATGGCCAAAATGCCAAGACTAATTTCCCAAGAGATCATCACAAGAGTACTAATAACCAACTAAGTAACATTAATGGTACTCTAAGGGCTAATGGTAGCACCAATGATCAAGACACAATGGCTCCATTTAATGCAGCATTGTCCGAGATACTTAGTGCCAAGCTCAAGAGATATTGCAAGGATCCTTCCCCTTCCCTTACTTGTCTCCGTCTCGACACCGATAACTCTCACATTGGTGTGTGGCAAAAACGAGCCGGTACGTGCTCCGGATCAAATTGGGTCATGAGGGTTGAGCTTGGCAAGGCAAGTACTATGGCTAAACAAAATGTCACAATTAACAACAATGATGGTTCGTCTCCTAAATCGTCCTACTTATCATCATCATCGTCTTCTTCTTCTTCTTCCTTTTCTTCTTCTTTACCTTCCTCAATCTCGCCACCAGAAGCTGGAGTGATGAGTGAGGAAGACAAAGCTGCATTGCAAATGATAGAGGAATTGCTTAATTGGAACACCCCTAGTACTCCATTTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102874.p1 GENE.S_Transcript_102874~~S_Transcript_102874.p1 ORF type:complete len:232 (+),score=40.02,AP2|PF00847.16|1.3e-11 S_Transcript_102874:283-978(+)
MVLPSKKFRGVRQRQWGSWVSEIRHPLLKKRVWLGTFETAEEAARAYDQAAILMNGQNAKTNFPRDHHKSTNNQLSNINGTLRANGSTNDQDTMAPFNAALSEILSAKLKRYCKDPSPSLTCLRLDTDNSHIGVWQKRAGTCSGSNWVMRVELGKASTMAKQNVTINNNDGSSPKSSYLSSSSSSSSSSFSSSLPSSISPPEAGVMSEEDKAALQMIEELLNWNTPSTPFN*

Click here to download the sequence:
Link to NCBI Protein BLAST