Transcript Information: S_Transcript_102941.p1


Annotated TAIR IDAT5G17280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5686355-5686762 | Forward length=135
E-Value5.8E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.06101266208
Replicate 28.0717522771396
Replicate 38.5466337948393
Condition 2: 8 Hour
Replicate 17.9320049350312
Replicate 28.4576500955064
Replicate 37.7984808310907
Condition 3: 24 Hour
Replicate 18.5248325816953
Replicate 26.7715046782989
Replicate 35.2289604254509


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102941.p1 GENE.S_Transcript_102941~~S_Transcript_102941.p1 ORF type:complete len:164 (+),score=24.39,Oxidored-like|PF09791.5|2.9e-15 S_Transcript_102941:383-874(+)
ATGGAAACGGCATTGAAATTCCATCCGAAATCGAAACCTTTCAATTTCAGCACTACACAACCAAAATCCACATCACTTTATGGGTTCGGGTTTGGGTTGTCTCTTCCCTTCATGAGAGATCTTGTCCCACTTAGGTTAACTCGCTTCAATCTCAATTACTATCATCCCCAAAAATTCCTCCAAAACCCTCTTAATTCACTTTCTCTAATCAAACCGGTCTCTTTGTCTCCGTCAATGGCCGAGAGGAGAGGGAATACTATCAATCTGGTGGAGACGGAGAAGGAGCATGAGAGAGGAAAGGATGTCCAGCCGCCGGTGAAGGAGTTGCCGCCACCGCCGGAGAAGCCGGAGCCCGGGGATTGCTGTGGAAGCGGGTGTGTTCGATGCGTCTGGGATATTTATTATGAGGAGCTTGAGGCTTATAATCAAATCCTTGAGCAATTCAAATCTCAACCCCCGCCTTCCAATTCCCAAAAGATTGTTGATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102941.p1 GENE.S_Transcript_102941~~S_Transcript_102941.p1 ORF type:complete len:164 (+),score=24.39,Oxidored-like|PF09791.5|2.9e-15 S_Transcript_102941:383-874(+)
METALKFHPKSKPFNFSTTQPKSTSLYGFGFGLSLPFMRDLVPLRLTRFNLNYYHPQKFLQNPLNSLSLIKPVSLSPSMAERRGNTINLVETEKEHERGKDVQPPVKELPPPPEKPEPGDCCGSGCVRCVWDIYYEELEAYNQILEQFKSQPPPSNSQKIVDS*

Click here to download the sequence:
Link to NCBI Protein BLAST