Transcript Information: S_Transcript_102944.p1


Annotated TAIR IDAT5G17280.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5686355-5686762 | Forward length=135
E-Value5.8E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1927807288157
Replicate 23.0941717062368
Replicate 34.8355954365538
Condition 2: 8 Hour
Replicate 11.6904272812362
Replicate 21.0913096897428
Replicate 31.2997468051818
Condition 3: 24 Hour
Replicate 12.6640101817798
Replicate 22.4874915144772
Replicate 33.5372379348638


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102944.p1 GENE.S_Transcript_102944~~S_Transcript_102944.p1 ORF type:complete len:164 (+),score=25.37,Oxidored-like|PF09791.5|5.1e-15 S_Transcript_102944:383-874(+)
ATGGAAACGGCATTGAAATTCCATCCGAAATCGAAACCTTTCAATTTCATCACTACAAATCCAAAATCCACATCAATTTATGGGTTCGGGTTTGGGTTGTCTCTTCCCTTCATGAGAGATCTTGTCCCACTAAGGCTAACTTGCTTCAATCGCAATTACTATCATCCCAAAAAATTCCTCCAAAACCCTCTTAATTCACTTTCTCTGATCAAACCGGCCTTTTTGTCTCCGTCAATGTCCGAGAGGAGAGAGAATACTATCAATCTGGGGGAAAAGGAGAAGGAGAAGGAAAAAGGAAAGGATGTCCGGCCGCCGGTGAAGGAGTTGCCGCCACCGCCGGAGAAGCCGGAGCCCGGGGATTGCTGTGGAAGCGGGTGTGTTCGATGCGTTTGGGATGTTTATTATGAGGAGCTTGAGGCTTATAATCAAATCCTTGAGCAATTCAAATCTCAACCCCCGCCTTCCAATTCCCAAAAGATTGTTGATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102944.p1 GENE.S_Transcript_102944~~S_Transcript_102944.p1 ORF type:complete len:164 (+),score=25.37,Oxidored-like|PF09791.5|5.1e-15 S_Transcript_102944:383-874(+)
METALKFHPKSKPFNFITTNPKSTSIYGFGFGLSLPFMRDLVPLRLTCFNRNYYHPKKFLQNPLNSLSLIKPAFLSPSMSERRENTINLGEKEKEKEKGKDVRPPVKELPPPPEKPEPGDCCGSGCVRCVWDVYYEELEAYNQILEQFKSQPPPSNSQKIVDS*

Click here to download the sequence:
Link to NCBI Protein BLAST