Transcript Information: S_Transcript_102980.p1


Annotated TAIR IDAT5G20280.1
Annotated Gene Namesucrose phosphate synthase 1F
Annotated Gene Symbol(s)ATSPS1F, SPS1F
Annotation TypeOrtholog
Chromosome Positionchr5:6844994-6849997 | Reverse length=1043
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4744536252824
Replicate 22.6374871767048
Replicate 32.1347379527507
Condition 2: 8 Hour
Replicate 112.119458064481
Replicate 210.209543828945
Replicate 311.042175324782
Condition 3: 24 Hour
Replicate 13.7306252640483
Replicate 23.3759188021694
Replicate 33.3501766762014


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_102980.p1 GENE.S_Transcript_102980~~S_Transcript_102980.p1 ORF type:complete len:1054 (+),score=225.81,Glycos_transf_1|PF00534.16|9.1e-25,S6PP|PF05116.9|5.3e-12,Sucrose_synth|PF00862.15|6.6e-09,Glyco_trans_1_4|PF13692.2|2.3e-07 S_Transcript_102980:208-3369(+)
ATGGCGGGAAATGACTGGATAAACAGTTATTTAGAAGCAATATTAGATGTGGGGCCAGGGCTAGATGATGCTAAATCATCGTTACTGCTAAGAGAAAGAGGAAGGTTTAGTCCAACTCGTTACTTTGTTGAGGAAGTCATCACTGGCTTTGATGAAACTGATCTTCACCGCTCTTGGGTTCGGGCACAAGCCACAAGGAGCCCACAAGAGAGGAACACTAGATTGGAGAATATGTGTTGGAGGATTTGGAATTTGGCTCGCCAGAAGAAGCAGCTGGAAAATGAATATGCTCAGCGGAAGGCAAAACGTCGTATGGAGCGTGAGAGGGGCCGTCGAGAAGCAACTGCTGATATGTCGGAGGATCTATCAGAGGGAGAGAAAGGTGACAGTGCAGCTGACCTATCTGCTCATGGTGACAGCAATCGTGGTAGGTTGCCAAGGATAAACTCTGCAGATGCCATGGAGGCCTGGGCTTGTCAGCAGAAGGGTAAAAAGCTTTACCTTGTATTGATAAGTCTGCATGGTCTGATTCGCGGAGAAAACATGGAACTTGGTCGTGATTCTGATACTGGTGGTCAGGTCAAATATGTGGTTGAGCTAGCTAGGGCTCTGGGATCAATGCCAGGAGTATATCGCGTTGATTTGTTAACTAGGCAAGTTTCAGCTCCTGATGTGGACTGGAGTTATGGTGAACCTACTGAAATGTTGAATCCGATAGATTCTAATGGCTTTGATGATGAGGAGATGGGAGAGAGCAGTGGTGCTTATATTGTCCGTATACCATTTGGACCCCGGGATAAGTATATCCCGAAAGAACAGCTCTGGCCCCACATTCCTGAATTTGTTGATGGTGCTCTGAACCACATAGTACAGATGTCCAAAGTTCTCGGGGAGCAGATTGGTGGTGGGGAACCAGTCTGGCCAGTTGCTATCCATGGACACTATGCAGACGCCGGTGATTCTGCTGCCCTTCTGTCTGGTGCACTTAATGTTCCAATGCTTTTGACTGGGCACTCTCTAGGCCGGGACAAGTTAGAACAACTCCTCAAGCAGGGCCGAATGTCTAAGGATGACATAAATAATACATACAAAATAATGCGTAGGATAGAAGGTGAAGAGCTAGCGCTTGATGCCTCTGAAATAGTCATCACCAGTACAAGACAGGAGATAGAGGAGCAGTGGCAACTTTATGATGGGTTTGATCTGTTGTTAGAACGCAAATTGCGTGCAAGGATTAAGCGTGGTGTAAGCTGTTATGGAAGGTTCATGCCTCGCATGGTTATAATTCCTCCTGGGATGGAGTTTCATCATATTGTTCCCCATGAGGATGAGATGGATGGTGAACCAGAAGGAAATGACGAACAGCCTGCATCACCTGATCCACCTATTTGGGCTGAGATAATGCGCTTCTTTTCCAACCCCAGGAAACCTATGATCCTTGCCCTTGCTAGACCAGACCCAAAGAAGAATATTACAACCTTGGTGAAAGCATTTGGAGAATGCCGTCCACTGAGGGAGTTGGCAAACCTTACACTTATAATGGGTAACAGGGATGGTATTGATGAGATGTCAACTACAAATGCTTCAGTTCTTCTCTCAGTGCTTAAGTTAATTGATAAATACGATCTGTACGGTCAAGTAGCTTACCCCAAGCATCATAAGCAAGCTGATGTTCCAGAAATTTATCGTTTGGCAGCAAAGACTAAGGGAGTCTTTATTAATCCAGCTTTCATTGAGCCATTTGGGCTGACTCTAATAGAGGCTGCTGCTCATGGTTTACCAATGGTCGCTACGAAAAATGGAGGTCCTGTCGATATCCAGAGGGTTCTTGATAATGGCCTTCTTGTTGATCCTCATGATGAGCAGTCCATTGCCACTGCTCTGCTGAAGCTTGTTGCAGATAAGCAACTCTGGGCCAAATGTCGGCAGAACGGACTGAAAAACATTCATCTGTACTCTTGGCCTGAGCATTGCAAGACCTACCTATCTCGAATAGCCAGTTGTAGACCAAGGCATCCACAGTGGCAAAGTAGCGATGAAGGGCTTGACAATCATGAACCTGAATCTCCAAGTGATTCTTTGAGAGATATAAAAGATATATCTTTGAACTTGAAGTTCACCATGGATGGAGAAAAGGGTGAAGATCTAGGTAAGGATGTGCCATCTGGGAGGAGAATTGTTGACGGCAAAAACAAGTTAGAGAATGCTGTTCTGTCATGGTCAAAGGGTGTCCACAAAGATGGACGGAAAGCTAGTGTTGCTGATAAAGTCGATCAGTCCACAAATACAGGTAAATATCCGGCATTCAGGAGGAGGAAACTTCTGTATGTCATTGCTGTAGATACCAATCATATAGATGGACTTTATGAGATTGTTCAGAAGATGTTCAATGGTGCTTCCAAGGAAAAGAATGAAGGTTCCGTGGGGTTCATATTGTCAACATCCTTTTCGATGCCTGAGATTCAGTCGTATTTGCTCTCGAAAGGCTTTAGCCTTCATGATTTCGATGCATACATATGCAATAGCGGCAGCAATCTATACTATTCATCACTGAACCCAGAGGATGGTCCAATTGCCCCAGATTCTGACTACCATTTGCACATTGAATATAGATGGGGTGGAGAAGGCCTCAGGAAAACTTTGCTTCGGTGGGCTGCCTTTGTCACCGAGAACAACTGTGGCAAGGAAGAGCAGATTGTCATTGAGGATGAAGATGTTTCTACAGATTATTGCTTTGCATTCAAATTAAAGAACTCAGAGAAGGTCCCCCCTATCAAGGAGATCCGCAAATCAATGAGAATTCAGGCTCTTCGTTGTCATGTAATTTGTTGTCAAAACGGTACCAGGCTTAATGTGATTCCAGTCCTGGCATCTCGTTCTCAAGCCCTCAGGTATCTATTTGTTCGATGGGGTGTTGACTTGTCGAAGATGGTGGTCTTTGTTGGAGAATGTGGAGACACCGACTATGAAGGCTTGTTGAGTGGTGTTCATAAGACGGTAATACTGAAGGGAGTTTGCAACACCGCTTTGAGCTCGCTCCATTCCAATAGAAGCTATCCTCTGTCGCATGTCGTGGCACTTGACAGCCCCAACATTGTCGAGGTGAGCGAAGGGTCTGACATCCAGTCTGTATTGGCAAAAATGGGAGCTTCCAAAATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_102980.p1 GENE.S_Transcript_102980~~S_Transcript_102980.p1 ORF type:complete len:1054 (+),score=225.81,Glycos_transf_1|PF00534.16|9.1e-25,S6PP|PF05116.9|5.3e-12,Sucrose_synth|PF00862.15|6.6e-09,Glyco_trans_1_4|PF13692.2|2.3e-07 S_Transcript_102980:208-3369(+)
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVRAQATRSPQERNTRLENMCWRIWNLARQKKQLENEYAQRKAKRRMERERGRREATADMSEDLSEGEKGDSAADLSAHGDSNRGRLPRINSADAMEAWACQQKGKKLYLVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLNPIDSNGFDDEEMGESSGAYIVRIPFGPRDKYIPKEQLWPHIPEFVDGALNHIVQMSKVLGEQIGGGEPVWPVAIHGHYADAGDSAALLSGALNVPMLLTGHSLGRDKLEQLLKQGRMSKDDINNTYKIMRRIEGEELALDASEIVITSTRQEIEEQWQLYDGFDLLLERKLRARIKRGVSCYGRFMPRMVIIPPGMEFHHIVPHEDEMDGEPEGNDEQPASPDPPIWAEIMRFFSNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSTTNASVLLSVLKLIDKYDLYGQVAYPKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIQRVLDNGLLVDPHDEQSIATALLKLVADKQLWAKCRQNGLKNIHLYSWPEHCKTYLSRIASCRPRHPQWQSSDEGLDNHEPESPSDSLRDIKDISLNLKFTMDGEKGEDLGKDVPSGRRIVDGKNKLENAVLSWSKGVHKDGRKASVADKVDQSTNTGKYPAFRRRKLLYVIAVDTNHIDGLYEIVQKMFNGASKEKNEGSVGFILSTSFSMPEIQSYLLSKGFSLHDFDAYICNSGSNLYYSSLNPEDGPIAPDSDYHLHIEYRWGGEGLRKTLLRWAAFVTENNCGKEEQIVIEDEDVSTDYCFAFKLKNSEKVPPIKEIRKSMRIQALRCHVICCQNGTRLNVIPVLASRSQALRYLFVRWGVDLSKMVVFVGECGDTDYEGLLSGVHKTVILKGVCNTALSSLHSNRSYPLSHVVALDSPNIVEVSEGSDIQSVLAKMGASKI*

Click here to download the sequence:
Link to NCBI Protein BLAST