Transcript Information: S_Transcript_103038.p1


Annotated TAIR IDAT4G20740.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11126151-11128334 | Forward length=727
E-Value1e-319
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7080810448716
Replicate 25.7768864022462
Replicate 35.2399974387946
Condition 2: 8 Hour
Replicate 17.9598949930246
Replicate 28.4128121625713
Replicate 37.4219525086982
Condition 3: 24 Hour
Replicate 16.9368153702722
Replicate 25.7133006898592
Replicate 36.2176906124033


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103038.p1 GENE.S_Transcript_103038~~S_Transcript_103038.p1 ORF type:complete len:718 (+),score=144.65,PPR_2|PF13041.2|11,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|9e-11,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|8.3e-08,PPR_2|PF13041.2|4.7e-07,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|2.5e+03,PPR_2|PF13041.2|7.9e-11,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|0.00068,PPR_2|PF13041.2|0.00023,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|10,PPR|PF01535.16|0.0015,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.0079,PPR|PF01535.16|0.0005,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.00039,PPR|PF01535.16|0.64,PPR|PF01535.16|0.44,PPR|PF01535.16|0.46,PPR|PF01535.16|0.027,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.0007,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|7,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|44,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|0.041,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|4.8e-08,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|1.8e-08,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|7.7e-06,PPR_1|PF12854.3|0.59,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|0.057 S_Transcript_103038:186-2339(+)
ATGCCACCTCCCACTAAACCCAACAAATTCTACTTCTATTATGGCAAAAGAAAGCCATCCCAGAACAGACCCACTGTCTATGGTGGACTCTTCTCAAACCGCCAAACCCTAAACCCCCCTAAAACCCCAAAGCCCAAAGAACCCACAGTTTTCACCCTTAAAAACTGGGACCCAGATGCCCAAACCACCCTCAAACCCTCAAATCCTAAAACCCCATCTGAGTATTTCTTCCAAATTGCCCAAAGACTCTCCCCAATTGCCCGTTTCATTTGTGACTCTTTCAGGAAGCACAAGAGGTGGGGCCCAGAAGTAGTGTCGGATCTCGGTAAGCTCCGTCGGGTCAACCCGGATCTTGTTGCTGAGGTCCTTAAGGTCCATGATGACCCTGTCATGTCATCCAAGTTCTTTCATTGGGCTGGTAAGCAAAAAGGTTATAAGCATACTTATGTTTCCTATAATGCATTTGCTTATTGTTTGAACCGGTTGAACCGGTTCAGGGCCGCTGATCAAGTCCCTGAACTAATGCATATGCAGGGTAGGCCACCTAGTGAGAAACAGTTTGAAATCTTGATTAGAATGCATGCTGATAATAATAGGGGACTTAGAGTGTATTATGTGTATGAGAAAATGAAGAAATTCGGGGTTAAACCTCGAGTATTTTTGTATAATAGGGTAATGGATGCGTTGGTGAAGACGGGTCATTTGGAATTGGCAATGTCGGTTTATGATGATTTTAAGAAGGATGGGTTGGTGGAGGAGACTGTCACTTATATGATCTTGATTAAGGGTTTGTGTAAGGCTGGGAGGATCGATGAGATGTTGGAGCTTTTGGGGAGAATGAGGCGTTTGTGTATACCGGATGTGTTTGCATATACTGCAATGATTAAGGTGTTGGTGGCGGAGGGGAATTTGGATGGGTGTTTGAGGGTTTGGGATGAGATGAAGAAGGATGGTGTGGAGCCAGATGCAATGGCTTATAGTACTTTGATCACGGCATTGTGTAAGGGGAATAGGGTTGAGAAAGGTTATGAGATGTTTGAGGGTATGAAGAAGAATGGGAACTTGATTGATCGAGCTATATACGGTGCGCTAGTGGAGGGTTTTGTGGCTGATGGTAAGGTTGGTTCGGCACTTGATTTGTTGAAGGATATGATAGATTCTGGGTACAGGGCTGATTTGTCGATTTATAATTCGTTGATAGAGGGGCTGTGTAATGTGAAACAGCTTGATAAGGCTCTTAGGCTCTTCCAAGTAACAGTTCAGGAGGGTCTCCAGCCAGATTTTGATACTGTGAATCCAATATTAGTGTCTTATGCAGAATCAAACGCAATGGATGCGTTCATCAATTTGGTTCTGGAGATGCAGAAATTAGGATTGCCTGTTATTGATGGTCTTTCGAGCTTCTTCTCTCTGATGGTTGAGAAGGATGAGAGATTGTCTCTCACATTGGAGGTGTTTGAAGATCTGAAGATCCAAGGCTTCTGTAATGTTTCAATCTACAATATTCTTTTAGGTGCTCTTTACAAGAGTGGGCAAACAAAGGAAACATTGTCCCTCTTCACCGAAATGAAAGATTCTGATTTTGAACCTGATTCAACTACATATAGTCATGTGATTACTTGTCTTGTTGATCTCGAGGACATCGAAGAGGCATGTGTGTGGTATAATAAAATAAAGGAGATGGACTGGGTTCCATCTATTGCAGCTTATTGTTCTCTGGCTAGAGGGCTTTGCAAAACCGGAGAAATTGATGCAGCAATTTCAATTGTCCAGGACTGTTTAGCTAATGTTACCAGTGGGCCCATGGAGTTCAAATATGCTCTTAACATCATACATGCATGCAAGTCGAATGATGCTGAGAAAGTGCTTGAAGTCATTAATGAGATGATGGAACAAGGCCATCTACCTGATGAAATTAATTACTGTGCTGTTATCTATGGCATGAGCAAGTATGGGACCATAGAGGAGGCCAGGAAAGTATTCTCGTATATGAAGGAGCGTGAAATTCTAAATGAAGCCAATGTGATTTTATATGATGACACACTTGTTGAGCACACAAAGAAGAAGACAGCAGACATGGTGTTGTCAGGATTGAAGTTCTTTGGACTAGAATCCAAGCTGAAATCGAAAGGTTGTACATTTCTGTCAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103038.p1 GENE.S_Transcript_103038~~S_Transcript_103038.p1 ORF type:complete len:718 (+),score=144.65,PPR_2|PF13041.2|11,PPR_2|PF13041.2|0.24,PPR_2|PF13041.2|9e-11,PPR_2|PF13041.2|2.4e-05,PPR_2|PF13041.2|1.6e-15,PPR_2|PF13041.2|2.6e-07,PPR_2|PF13041.2|8.3e-08,PPR_2|PF13041.2|4.7e-07,PPR_2|PF13041.2|1.3e+02,PPR_2|PF13041.2|2.5e+03,PPR_2|PF13041.2|7.9e-11,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|0.00068,PPR_2|PF13041.2|0.00023,PPR|PF01535.16|2.2e+03,PPR|PF01535.16|10,PPR|PF01535.16|0.0015,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|5.1e-06,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.0079,PPR|PF01535.16|0.0005,PPR|PF01535.16|1.3e+03,PPR|PF01535.16|0.00039,PPR|PF01535.16|0.64,PPR|PF01535.16|0.44,PPR|PF01535.16|0.46,PPR|PF01535.16|0.027,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.0007,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|7,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|37,PPR_3|PF13812.2|0.024,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|44,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|0.041,PPR_1|PF12854.3|3.6,PPR_1|PF12854.3|4.8e-08,PPR_1|PF12854.3|0.032,PPR_1|PF12854.3|1.8e-08,PPR_1|PF12854.3|4.9,PPR_1|PF12854.3|7.7e-06,PPR_1|PF12854.3|0.59,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.044,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|0.057 S_Transcript_103038:186-2339(+)
MPPPTKPNKFYFYYGKRKPSQNRPTVYGGLFSNRQTLNPPKTPKPKEPTVFTLKNWDPDAQTTLKPSNPKTPSEYFFQIAQRLSPIARFICDSFRKHKRWGPEVVSDLGKLRRVNPDLVAEVLKVHDDPVMSSKFFHWAGKQKGYKHTYVSYNAFAYCLNRLNRFRAADQVPELMHMQGRPPSEKQFEILIRMHADNNRGLRVYYVYEKMKKFGVKPRVFLYNRVMDALVKTGHLELAMSVYDDFKKDGLVEETVTYMILIKGLCKAGRIDEMLELLGRMRRLCIPDVFAYTAMIKVLVAEGNLDGCLRVWDEMKKDGVEPDAMAYSTLITALCKGNRVEKGYEMFEGMKKNGNLIDRAIYGALVEGFVADGKVGSALDLLKDMIDSGYRADLSIYNSLIEGLCNVKQLDKALRLFQVTVQEGLQPDFDTVNPILVSYAESNAMDAFINLVLEMQKLGLPVIDGLSSFFSLMVEKDERLSLTLEVFEDLKIQGFCNVSIYNILLGALYKSGQTKETLSLFTEMKDSDFEPDSTTYSHVITCLVDLEDIEEACVWYNKIKEMDWVPSIAAYCSLARGLCKTGEIDAAISIVQDCLANVTSGPMEFKYALNIIHACKSNDAEKVLEVINEMMEQGHLPDEINYCAVIYGMSKYGTIEEARKVFSYMKEREILNEANVILYDDTLVEHTKKKTADMVLSGLKFFGLESKLKSKGCTFLSG*

Click here to download the sequence:
Link to NCBI Protein BLAST