Transcript Information: S_Transcript_10320.p1


Annotated TAIR IDAT1G15130.1
Annotated Gene NameEndosomal targeting BRO1-like domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5206217-5209848 | Reverse length=846
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.032525333228
Replicate 218.205847128756
Replicate 318.239820894417
Condition 2: 8 Hour
Replicate 125.913738356027
Replicate 227.212700973751
Replicate 325.016153668438
Condition 3: 24 Hour
Replicate 119.49482267498
Replicate 218.507855908313
Replicate 318.839448816046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10320.p1 GENE.S_Transcript_10320~~S_Transcript_10320.p1 ORF type:5prime_partial len:818 (+),score=198.27,BRO1|PF03097.14|2.6e-96,BRO1|PF03097.14|3.6,ALIX_LYPXL_bnd|PF13949.2|1.4e+03,ALIX_LYPXL_bnd|PF13949.2|6.2e+02,ALIX_LYPXL_bnd|PF13949.2|1.1e-74 S_Transcript_10320:3-2456(+)
GTAAAGCAACTCCGTTCTTCTTTCTCCTTATCCTCCGATTCATCTCCAGCTCGTCGAGACCTCCTAATCAAGTACTTCAAATGCCTTTGTTTGATGGAAACTCGGTTCCCAATTTCCCCTGATAAAGACCACATCAACTCAATCCAATTCACTTGGTTTGACGCCTTTAAGCAGAAGCAAAAATCTTGCCAGACTAATATCCATTTAGAGAAGGCTGCTGTGCTGTTTAATCTTGGGGCTGTTTATAGTCAGATTGGGCTTTCCTTTGATCGGTCTAGTGTTGATGGGAGGAAACAGGCTGTTCATAATTTTGCCCTAGCGGCTGGGGTTTTCGCTTATTTGAGGGATAATGTGGCGGTTAAGGCGGCCGCTGGTGGGGCTGCCACCGTTGATGTTTCGGTCGAGTGTGCCGGTATGTTGGAGAGGTTGATGCTTGCTCAGGCTCAGGAGTGTGTTTTTGAGACTACTATTGCTAAAGGGAGTACTCCTGGTGTTTGTGCCAAGATCTCTCGTCAGGTGGGAATATACTATGAAGAAGCTTTAGCAGCATTAAATGTTGCTCCTCTTAATTCACACTTTGACAAGACGTGGGTAGCTCATGTACAGCTGAAAGCAGCTCTTTTTTTTGCCGAGGCTTGCTATAGGTACAGTTTAGAGCTTCATGAGAAAGAGGAGATTGCTGAAGAAATTGCTAGGTTGAAGACTGGGATTAGTGCTTTGTCAGAAGTGAAGAGATCAGCCAAAGGAGCTCCTGCACAACTTCTTGATGCTGTTAGTAAGCTGGAGACGAGTCTTAATCGTAATTTGGAGAGGGCAATGAAAGAGAATGATAGAGTGTACCTGCAAAGGGTCCCACCAGCCAGTTCTTTGTCACCTCTATCTGCATTCTCCATGGTAAAACCCACGCCTTTGGATGAAGTATTGGATGCCAGCAAAGAAAAGATGTTTCAATCAATTGTCCCAGACAGTAGTGCAAAGGCGCTATCAAGATACACTGAAATGGTTGATGATGTTATCAGAACACAGGCTGAGAAGCTACAGCAAGGAAGTGAGCTGGCTAGAGTGAGGCTTAAGGAAATGGACTTGCCTGATTCTATTCTTGCACTAGAAGGGAATATGTCCCTACCAGAAACTCTTAAAGATGATGTTGAAGCAGTGCAGATTAGTGGTGGTCCAGCTGGACTTGAAAGCGAGCTGCAGCAGCTTAGGGATCTGAAAAGGGTCAATCAGGAATTGTTGGTTCAGACAGAGGAGTTGTTGCAGAAAGAATCACAAGAAGACGCTCAATTTAGAAGTCAATTTGGAACGAGATGGACTAGGCCTCAATCTAGTACACTTACAAAGAACCTGCAGGATAGGCTGAACAGATTCGCAGGGAACTTGAAGCAAGCTACAGACAGTGATGCTAGAATTGAGCGCTCTGTGAGGGATAATTCTGCGCTCATGTCCATCCTTGATCGGCATCCGATTGAGGCTGCGCTTCCGACCCTTGCAAAGCCAATTATGTCATTGGATGCTAATGAGGATGCTATTGTTGGAGCATTGAAGCAGAGTCTGAGGCAGTTGGAGACTCTTGGAGCACAACGAGCAGGTCTTGAAGACATGTTAAAAGAAATGAAAAGAAAGGATGACATTCTACCAAAGCTGATGACATCTACTGGTTCTTATGAGGATCTGTTTAGGAAAGAGATAGCAAAATATGACCACATATGCAAAGAGATTTCTCAGAATATTGAGGCACAAGAGGAGCTACTTATGCAAATCCAGGCCCAGAATGATCAATTCTCTGCTCTCTTTAATCTTGAAGATTACAAGGCTGCTCGGGACAGGTGCTGTAAGCAGATTGAAGCTGCCATAGCCAAGTACCGAGAAATTAAGGACAACATAAATGAGGGACTGAAGTTCTATGTAACCCTTCAGGATGCAATTACAAATGTAAAGCAACAGTGTAGTGATTTTGTGATGACAAGAAATATCCAATGTCGGGAAATGATAGAAGATGTGCAGAGGCAAATATCAGGTCTCAACTTCCAAGATAGGAACACAAGCACTAACCAAAGCTACCCGTCAGTAGGACAGACTCATCAGCCTCCAAGAACAATGTCTCCGCAGCAAACAGAACCAGGAATGCCTCAAGCTTCGCGTCCACAAACACCCTATTACCAGCCTCCCCAGCATCCATCCATGCCTGGATATGGTGGTCCTTATGGTTCTTCGCAGCAGCCTCATCCTTCTCACTATCAGGCTCCACCTTCAGCAGGTACAATATACCCACCCCAGCAACCACACCAGCAACCACCTCCCAGCCATGAATATGGCCAACCTGCTTATCCTGGATGGCGGGGTCCGTACTATAATACACATTCTCAACAGCCTGCGTCCTTTCCCCGTCCACCATACACAGTTCCAGGGTCATACCCTCCTCATCAAAGTGGGTACTATAAGCAGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10320.p1 GENE.S_Transcript_10320~~S_Transcript_10320.p1 ORF type:5prime_partial len:818 (+),score=198.27,BRO1|PF03097.14|2.6e-96,BRO1|PF03097.14|3.6,ALIX_LYPXL_bnd|PF13949.2|1.4e+03,ALIX_LYPXL_bnd|PF13949.2|6.2e+02,ALIX_LYPXL_bnd|PF13949.2|1.1e-74 S_Transcript_10320:3-2456(+)
VKQLRSSFSLSSDSSPARRDLLIKYFKCLCLMETRFPISPDKDHINSIQFTWFDAFKQKQKSCQTNIHLEKAAVLFNLGAVYSQIGLSFDRSSVDGRKQAVHNFALAAGVFAYLRDNVAVKAAAGGAATVDVSVECAGMLERLMLAQAQECVFETTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPLNSHFDKTWVAHVQLKAALFFAEACYRYSLELHEKEEIAEEIARLKTGISALSEVKRSAKGAPAQLLDAVSKLETSLNRNLERAMKENDRVYLQRVPPASSLSPLSAFSMVKPTPLDEVLDASKEKMFQSIVPDSSAKALSRYTEMVDDVIRTQAEKLQQGSELARVRLKEMDLPDSILALEGNMSLPETLKDDVEAVQISGGPAGLESELQQLRDLKRVNQELLVQTEELLQKESQEDAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQATDSDARIERSVRDNSALMSILDRHPIEAALPTLAKPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFRKEIAKYDHICKEISQNIEAQEELLMQIQAQNDQFSALFNLEDYKAARDRCCKQIEAAIAKYREIKDNINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCREMIEDVQRQISGLNFQDRNTSTNQSYPSVGQTHQPPRTMSPQQTEPGMPQASRPQTPYYQPPQHPSMPGYGGPYGSSQQPHPSHYQAPPSAGTIYPPQQPHQQPPPSHEYGQPAYPGWRGPYYNTHSQQPASFPRPPYTVPGSYPPHQSGYYKQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST