Transcript Information: S_Transcript_103213.p1


Annotated TAIR IDAT5G45400.1
Annotated Gene NameReplication factor-A protein 1-related
Annotated Gene Symbol(s)RPA70C, ATRPA70C
Annotation TypeOrtholog
Chromosome Positionchr5:18398990-18401644 | Forward length=853
E-Value1.5E-227
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8273508900782
Replicate 22.9392249157566
Replicate 32.2081522123704
Condition 2: 8 Hour
Replicate 12.5532929384763
Replicate 22.9803980481255
Replicate 33.5586322308485
Condition 3: 24 Hour
Replicate 11.5103545077814
Replicate 22.7517612706526
Replicate 32.6370434285282


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103213.p1 GENE.S_Transcript_103213~~S_Transcript_103213.p1 ORF type:5prime_partial len:593 (+),score=131.17,Rep_fac-A_C|PF08646.6|4.3e+02,Rep_fac-A_C|PF08646.6|2.9e-53,REPA_OB_2|PF16900.1|9.3e+02,REPA_OB_2|PF16900.1|1.2e-28,tRNA_anti-codon|PF01336.21|8.3e-12,tRNA_anti-codon|PF01336.21|7e+02,tRNA_anti-codon|PF01336.21|90,zf-CCHC|PF00098.19|0.061,zf-CCHC|PF00098.19|1.1e-05 S_Transcript_103213:3-1781(+)
GTCAAGGCTAGGGTGACAACAAAGAGTGAACTTACGCACTACAACAATCAACGTGGGGAAGGGAAGGTGTTTTCCTTTGATCTGCTGGATTCAGATGGTGGAGATCTAATCCAAGTTACCTGCTTCAATGCTGTTGCTGATCAATTCTACAATCAAATTGAGGCTGGTAAGGTGTACTTGATTTCCAAAGGAACTGTGAGACCTGCTCAGAAGAATTTTAATCATCTGCAAAATGAGTATGAGATCCATTTGGACACCACATCACTGGTGCAGCCTTGTCTTGACAATGACAGTAGCATTCCAAGGCAGCAATTTCACTTTAAGTCTATCGGTGACATTGAGGGCTTGGAGAACGATAGTGTCATAGATTTGATCGGTGTAGTTTTTTTAATCAGTCCATCAGCTTCAATTATGAGGAAAAACGGCACTGAAACACAGAAGAGGAGCCTGCATTTGAAGGACATGTCTGGTAGAAGTGTTGAATTGACTTTGTGGGGAAACTTCTGTAATGCAGAAGGACAGACATTGCAAAGTATGTGTGATGCCGGAAACTTTCCTGTTGTAGCTGTCAAAGCAGCCAGAGTTAATGAATTTAATGGCAAGGCAGTGGGAACTATTGGCACGAGTCAGTTATTTATCGAACCAGATTTTCCAGAAGCTCAGAGGCTAAAGGAATGGTTTGACAAGGAGGGGAGGAATGCTCCTTCGGTTTCCATATCAAGGGAGATGACAAGTGTGGTCAGGAACGATGTACGGAAGACCATATCTGATATTAAGGATGAGAAATTGGGGACTTCTGAGAAGCCAGATTGGATTACGGTCTTTGCCACTGTATCATTTATGAAATCCGACAACTTTTGCTATGCAGCATGCCCCATCCTGATTGGGGATCGCCAATGCAATAAAAAGGTCATAAATAATGGAGATGGGAAGTGGCGTTGTGATAGATGCGACCAGTCTGTTGATGAACCTGATTACAGGTATATTCTTCAGTTTCAAATACAGGATCATACAGGTGTGACCTGGGTCACTGCATTTCAGGAAGCTGGTGAAGAGATTTTAGGCCTCTCTGCTAAAAGTTTGTTTCATCTGAAACATGAAGAAGGAGATGAAGAGAAAGTTCGGGAAATCATCCAAGAAGCTGTTTTCAGAAAGTACATGTTCAAGTTGAAAGTGAAGGAGGAGATGTTCAATGATGAGCAGCGAGTTAAATCAACAGTGGTCAAAGCAGAGAAAATTAATTTTGCAGCGGAAACAAGGTTTCTGTTTGGTTTGGTGGACAAGCTCAAGGTGGGTTCAGGTGCCCTTGCTCCAAAACCAGAGGTTTCAACTCCTGTGAGACCTGGAATTAATATTGTTGGGACTGGACAGCCTTCTGTTTCAGGTATCAGCGCTGGAACAAATATGGGCCTCACTGGTAGAGAAATGGGCATTTCCAGTAATCAGACGAGCCATGGAAACCCATATAGTGGTGGGTATGGGGTTGCATCTGGTATGTATACAACCTGTAGTAGCTGTGGTGGTACTGGCCATAACGCAACAAATTGCCCTAGCATCATTAATGGTCCAGGGCAATCATCAGGAGCCTTTTTCAATCAAACGCCAATTGGAGCTACTACTGGTACCAATTCTGGACAACAGTGCTTCAAATGCAATAAATTTGGGCACTTCGCAAGGGAGTGTCCTGGACTCAGTGCTGTGCCTCCCGCATATGGTAGCACTAATGTTGGTCCTGGAAGATATAGTGGTGTTCAGAGGCAACATGTTGGGGGCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103213.p1 GENE.S_Transcript_103213~~S_Transcript_103213.p1 ORF type:5prime_partial len:593 (+),score=131.17,Rep_fac-A_C|PF08646.6|4.3e+02,Rep_fac-A_C|PF08646.6|2.9e-53,REPA_OB_2|PF16900.1|9.3e+02,REPA_OB_2|PF16900.1|1.2e-28,tRNA_anti-codon|PF01336.21|8.3e-12,tRNA_anti-codon|PF01336.21|7e+02,tRNA_anti-codon|PF01336.21|90,zf-CCHC|PF00098.19|0.061,zf-CCHC|PF00098.19|1.1e-05 S_Transcript_103213:3-1781(+)
VKARVTTKSELTHYNNQRGEGKVFSFDLLDSDGGDLIQVTCFNAVADQFYNQIEAGKVYLISKGTVRPAQKNFNHLQNEYEIHLDTTSLVQPCLDNDSSIPRQQFHFKSIGDIEGLENDSVIDLIGVVFLISPSASIMRKNGTETQKRSLHLKDMSGRSVELTLWGNFCNAEGQTLQSMCDAGNFPVVAVKAARVNEFNGKAVGTIGTSQLFIEPDFPEAQRLKEWFDKEGRNAPSVSISREMTSVVRNDVRKTISDIKDEKLGTSEKPDWITVFATVSFMKSDNFCYAACPILIGDRQCNKKVINNGDGKWRCDRCDQSVDEPDYRYILQFQIQDHTGVTWVTAFQEAGEEILGLSAKSLFHLKHEEGDEEKVREIIQEAVFRKYMFKLKVKEEMFNDEQRVKSTVVKAEKINFAAETRFLFGLVDKLKVGSGALAPKPEVSTPVRPGINIVGTGQPSVSGISAGTNMGLTGREMGISSNQTSHGNPYSGGYGVASGMYTTCSSCGGTGHNATNCPSIINGPGQSSGAFFNQTPIGATTGTNSGQQCFKCNKFGHFARECPGLSAVPPAYGSTNVGPGRYSGVQRQHVGGF*

Click here to download the sequence:
Link to NCBI Protein BLAST