Transcript Information: S_Transcript_103327.p1


Annotated TAIR IDAT1G01040.2
Annotated Gene Namedicer-like 1
Annotated Gene Symbol(s)DCL1
Annotation TypeOrtholog
Chromosome Positionchr1:23519-31079 | Forward length=1910
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0459973849475
Replicate 27.923409502193
Replicate 37.3416455729862
Condition 2: 8 Hour
Replicate 125.888182479069
Replicate 226.422997761134
Replicate 325.003262820411
Condition 3: 24 Hour
Replicate 17.7125587640034
Replicate 27.405575254588
Replicate 36.6467805437863


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103327.p1 GENE.S_Transcript_103327~~S_Transcript_103327.p1 ORF type:complete len:1977 (+),score=481.65,Ribonuclease_3|PF00636.22|1e-30,Ribonuclease_3|PF00636.22|2.6e-24,Ribonucleas_3_3|PF14622.2|5.7e-07,Ribonucleas_3_3|PF14622.2|0.39,Ribonucleas_3_3|PF14622.2|3.5e-14,Dicer_dimer|PF03368.10|7e-21,Dicer_dimer|PF03368.10|4.1e+03,Dicer_dimer|PF03368.10|1.9e+02,PAZ|PF02170.18|4.1e-22,dsrm|PF00035.21|3.9e+02,dsrm|PF00035.21|2.7e-05,dsrm|PF00035.21|1.5e-08,Helicase_C|PF00271.27|1.6e-17,DND1_DSRM|PF14709.2|1.4e+03,DND1_DSRM|PF14709.2|9.1e-14,ResIII|PF04851.11|1.3e-13,DEAD|PF00270.25|4.5e-12,DEAD|PF00270.25|9.4e+03,DEAD|PF00270.25|1.6e+03 S_Transcript_103327:533-6463(+)
ATGGAGGTTGGAGATAAGGGCTCCGATGACGCAAGACCGACTTACTGGCTTGATGCTTGCGAAGAAGATGACATCATCCCTTGCGATCTCATCGGCGATTTCGGTAATGCCGGTTCCGATCATAGCTTGTTCGGCGGTATTGATCACATTCTTGATACTTTTCAAAACGGTGCCGTTTTGCCCTGTCATAATGGCGGTATGGGCATTAATATCACTCCTCCTTCTATTGCTGCTGAGATTATTACTAATAATTATAAGGAAGTAGTTGTCGTAAATTCTTCTGGTACTGGCAATGGTAGCTTATGTAAAGAAATTCAAGTTGAGAATATGAATTGCGATTTTGAGGTGCATAATAACTCATTTAATGGTGGTGTCAAAATGGATGTTGATACCAACGCTGACCATTGTGATGGAAGGAATTGTTTGGTTGATGATACTGATACTTGTAAAGTGAATGGAGTAGTGAAAGATGGAAATAATTTAAGTGATAGGGAGAGGGAGAGTGAAGAACGGAATGGGAAAAGGTCTCGTGTTAGTGGTGGTTATATTTATAGAGATGAGAGGTCATATTCGAGCCGAGGGCAGAATGGTAGTAGGGATTGGGTGAGTAGTAATGGAAGGAAGAGGGGTCGAGATTGGGACGATAATAATGCCAGGAGGGATAGGGATAGAGATAGAGAAAGGGGTGACCTGAGTAGTGGTAGTAGTAGGAGAAGAGAGTATTATAATGGTAGAAGAGAGAGTCGAGATAGGGAGTGGAGAGAAAGAGAAGTGAAGGGTTATTGGGAGAGGGAAAGGCCCGGTTCAAGAGAGATCGTGTATCGTTCTGGTTCATATGAAGTGGATTGGAATAGAGTTGGGAACAAGATGGAGTTCGAGAAGGACCGCGAATGTAATGGGATAGTGGAGAAGAATGATGTGAGTCATGGGGAGAAGAATTTGGAGGAGCAGGCTCGACAGTATCAGTTGGATGTACTTGAGCAAGCTAAGCAGAAAAATACTATTGCTTTCCTCGAGACTGGAGCCGGGAAAACTCTAATTGCTGTTTTACTCATCAAAAGCATTTGCAATAGATTGCAGCAGCAAGACAAGAAATTGCTCGCTGTGTTTCTAGTGCCCAAAGTTCCACTGGTTTATCAGCAAGCAGAAGTCATACGCGACCAAACTGGTTACAATGTAGGCCATTATTGTGGTGAGATGGGTCAAGACTTTTGGGATACTCGAAGGTGGCAGCGTGAGTTCGAAACCAAGCAGGTTTTAGTTATGACCGCTCAAATATTGTTGAATATTCTTAGGCACAGCATAATAAAAATGGACTTGATACACCTCCTTATTTTGGATGAGTGTCACCATGCTGTCAAGAAACATCCTTATTCATTGGTCATGTCTGAATTCTATCATACAACTCCTAAGGAGAAGAGACCCACTGTCTTTGGAATGACTGCTTCTCCTGTTAACTTAAAGGGTGTTTCCAGCCAAGTGGATTGTGCAATCAAGATACGCAATCTTGAGACCAAGCTGGACTCCATAGTTTGTACAATAAAAGACCGTAAAGAGCTGGAGAAACACGTTCCAACCCCTTCAGAAATTGTTGTGGAGTATGACAAAGCAGCAACATTGTGGTCTCTTCATGAACAAATCAAACAAATGGAGCTAGCTGTTGAAGAAGCAGCACGAGCAAGTTCAAGAAAAAGCAAATGGCAGTTCATGGGAGCTAGAGATGCAGGAGCCAGGGAAGAGCTTCGTCAAGTGTACGGTGTCTCGGAAAGGACTGAAAGTGATGGTGCTGCTAATTTGATTCAAAAATTAAGGGCCATTAACTATGCACTTAGTGAATTGGGACAGTGGTGTGCGTACAAGGTTGCACAATCTTTCCTAGTAGCCTTACAGAATGATGAGAGGTCAAACTACCAGCTTGATGTCAAGTTTCAAGAATCCTATTTGAGCAAGGTTGTCACGCTCTTACAGTGTCAGCTCTCAGAGGGAGCTGCATCTAACAAGGATGAAAATGGTGTGATAGAAGATAGTGGCTGTCCTCAGCATCATAATGTCGATGATATTGAAGAAGGAGAGCTTCCTGATTGTCATGTTGTTTCTGGTGGAGAACATGTTGATGTTGTCATTGGAGCTGCTGTAGCTGATGGAAAGGTCACTCCTAAGGTGCAGTCACTGATAAAAATTCTTATGGGGTATCAGCACACGGAGGATTTTCGTGCAATCATATTTGTTGAGAGAGTTGTCTCTGCATTGGTTCTTCCGAAGGTTTTTGCGGAGCTTCCATCTTTGAGTTTTGTGAAGTGTGCAAGTTTGATTGGGCATAACAATAGTCAGGAAATGCGGACATCTCAAATGCAGGATACAATTGCCAAATTCCGAGATGGGCGTGTAACTTTGCTAGTTGCTACTAGTGTAGCTGAGGAAGGACTTGATATACGGCAATGCAATGTGGTCATTCGCTTTGATCTTGCAAAAACTGTTTTGGCTTACATTCAATCAAGGGGTCGTGCAAGAAAGCCAGGATCAGATTATATCTTGATGGTTGAAATGGGGAATGTGTCACATGAAACATTTTTGAAGAATGCTAGGAATAGTGAAGAAACTTTGCGGAGAGAAGCAATTGAGAGAACTGATGTAAGTCATCTCAAGGGTAGCTCAAGGTTAATATCAGTGGATGCTGGTCCTGGTTCAGTGTATCAAGTTGCTTCAACTGGCGCTACTGTGAGCTTGAATTCTGCTGTGGGCCTTATCCATTTTTACTGCTCACAGCTGCCCAGTGACAGATATTCAATTCTTCGTCCTGAATTTTTCATGGAGCGGCATGAGAATCCAGGGGGAGCTATAGAGTATTCTTGCAGGCTTCAACTCCCTTGCAATGCTCCATTTGAAAAGCTGGAGGGCCCAGTTTGCAGTTCAATGAGGCTTGCTCAGCAGGCTGTTTGCCTAGCTGCTTGCAAGAAGCTCCACGAGATGGGGGCATTTACTGACATGCTCTTGCCTGACAAGGGAAGTGGTGAAGATGGTGAAAAGGTTGAGCAGAATGATGAAGGAGACCCGCTTCCAGGAACTGCCAGACACAGAGAATTTTATCCCGAAGGCGTAGCCTCTATCCTTCGGGGGGAATGGATCTTGTCTGGAAGAGATGTTTGTGACAATTCAAAATTATTTCATCTTTATGTGTATGCTGTGAAGTGGGAAAATATAGGATTCTCAAAGGATCCTTTTTTGACCCAAGTTTCAGATTTTGCAGTATTATTTGGCAATGAGCTGGATGCAGAGGTGTTATCGATGTCGATGGATCTCTTTATCGCTCGAACCATGAAGTGTAAGGTATCTCTTGTATTTCAGGGTTCAATAGATATCACAAAAAGCCAGCTAGCATCCCTGAAGAGTTTTCATGTGAGATTAATGAGCATCGTATTGGATGTGGATGTTGAACCACAAACAACTCCATGGGATCCTGCAAAGGCTTATTTATTTGTTCCTATGGTTGGCGATAAATCTTTAGATCCTCTAGGAGAAATTAACTGGAATCTTATTGAGTATATAAAAAAAGCAGATGCATGGACAAACCCCTTACAAAGGGCACGTCCTGATGTTTACTTGGGAACCAATGAGCGGAGTCTGGGTGGGGATAGAAGAGAATATGGGTTTGGGAAGCTGCGTTATGGTATGGCGTTTGGACAGAAGTCTCATCCTACTTATGGTATCAGAGGAGCAATTGCGCAATATGATGTTGTCAAAGCATCTGGGTTGATTCTTAAACGTGATGACATTTTGGATGACAACTTGGACATTTCTGAAGGCAAATTGATGCTGGCTGATACCTGTATTAGTGCAGAAGATTTAGTGGGTAAAATTGTGACTGCTGCTCACTCTGGAAAAAGGTTTTATGTGGATTCTGTACGTTATGATATGACTGCAGAAAACTCATTTCCCAGGAAAGAAGGTTATCTTGGTCCTTTGGAATATAGTTCATATGAGGACTACTACAAGCAGAAGTATGGAGTTGAATTGATATACAAGCAGCAGCCATTACTTAGAGGACGTGGCGTTTCATATTGCAAGAATCTCCTCTCTCCAAGATTTGAACATTCAGATGAACCTGAAGGTGAGTCTGAGGAGATACTTGACAAAACATACTATGTGTTTTTACCTGCTGAGTTATGTTTTGTACATCCGCTTCCTGGGATGCTTGTCCGAGGTGCCCAAAGACTGCCATCAATAATGAGAAGGGTGGAAAGCATGTTGCTTGCTATTGAGCTCAAGAATATTATCAGCTACCCTGTTCCTGCTTCTAAGATTCTGGAAGCTTTGACTGCGGCCTCATGTCAAGAGACATTTTGCTATGAGAGAGCAGAGCTTCTGGGAGATGCGTATTTGAAATGGGTAGTTAGTAGATATCTTTTTCTTAGATATCCTCAAAAGCATGAGGGCCAACTGACACGAATGAGACAGCAGATGGTAAGCAATATGGTGTTGTACCAGCATGCTTTGAATAAAGGACTTCAGTCATATATCCAAGCAGATCGCTTTGCCCCATCTAGATGGGCTGCACCTGGTGTTCTACCAGTATTTGATGAGGACAGCAAGGAAGAGGAGTCGTCCTTATTCGATCAGGAGAAATCAGCTGCCCAGGCTAATATGGCGAATGATTCTGATGATTTTGATGATGATGAAATGGAAGATGGTGAAGTTGAAAGTGATTCAAGTTCATACAGAGTTCTTTCTAGCAAGACGTTGGCAGATGTTGTTGAGGCACTAATTGGAGTTTACTATGTTGAAGGTGGAAAGAGTGCTGCCAACCACTTAATGAAATGGATTGGGATTGACATAGAGTATAATCCAGAAGAGATTGAATGCCCAAATAGGGTGACCAACGTTCCAGATGGTGTACTTAGGAGTGTCGATTTTGAAGCCTTGGAAGGTGCTTTAAAGATCAAGTTTAGTGACAGAACGCTACTTGTAGAAGCAATTACTCATGCTTCACGCCCGTCTTCTGGAGTCTCCTGCTACCAGCGGCTGGAGTTTGTAGGTGATGCTGTATTGGACCACCTCATTACTAGGCACTTGTTCTTCAAGTATACAGATTTGCCCCCTGGCCGTTTGACGGATTTGCGTGCTGCAGCTGTAAACAATGAAAATTTTGCTCGGGTTGCAGTTAAGCACAAGCTTCATTTGCATCTACGACATGGATCCACTGCCCTCGAGAAGCAGATACGAGACTTTGTGAAGGAAGTTCAAGAAGAGTTGTCAAAACCTGGATTTAATTCGTTCGGCTTAGGAGATTGTAAGGCTCCCAAGGTTCTTGGTGATATTGTTGAATCGATTGCTGGAGCTATTTTCCTTGACAGTGGACGTGATACCACTATTGTTTGGAGAGTTTTTGAGCCATTACTGCAACCAATGGTTACTCCGGAAACACTTCCAATGCATCCAGTAAGAGAGCTGCAGGAACGATGCCAGCAGCAAGCTGAAGGTCTGGAATATAAGGCTACTCGAAACGGGAATTTAGCCACTGTTGAAGTTTATGTTGATGGTGTCCAAATTGGGGTAGCTCAAAATGCACAGAAGAAGATGGCACAAAAGTTAGCTGCTCGAAATGCTCTGCTTGTTCTTAAGGAGAAAGAAGAAGCTGAGGCCAAGGATAAAGCTGAGGAGAGTCAAAAGAAGAAGAAGAATGGTGGACAGACATTCACCAGGCAGACACTGAATGATATTTGTCTACGTAGAAATTGGCCCATGCCACTCTACAGGTGTGTGAATGAAGGTGGCCCTGCACACGCTAAGAGGTTTACCTTTGCTGTTCGAGTTAATACCACAGACAGGGGTTGGACTGATGAATGCATCGGAGAGCCTATGCCTAGTGTTAAGAAGGCCAAAGATTCTGCTGCAACTCTCCTGTTGGAGCTTCTAAATAAGTGGTACTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103327.p1 GENE.S_Transcript_103327~~S_Transcript_103327.p1 ORF type:complete len:1977 (+),score=481.65,Ribonuclease_3|PF00636.22|1e-30,Ribonuclease_3|PF00636.22|2.6e-24,Ribonucleas_3_3|PF14622.2|5.7e-07,Ribonucleas_3_3|PF14622.2|0.39,Ribonucleas_3_3|PF14622.2|3.5e-14,Dicer_dimer|PF03368.10|7e-21,Dicer_dimer|PF03368.10|4.1e+03,Dicer_dimer|PF03368.10|1.9e+02,PAZ|PF02170.18|4.1e-22,dsrm|PF00035.21|3.9e+02,dsrm|PF00035.21|2.7e-05,dsrm|PF00035.21|1.5e-08,Helicase_C|PF00271.27|1.6e-17,DND1_DSRM|PF14709.2|1.4e+03,DND1_DSRM|PF14709.2|9.1e-14,ResIII|PF04851.11|1.3e-13,DEAD|PF00270.25|4.5e-12,DEAD|PF00270.25|9.4e+03,DEAD|PF00270.25|1.6e+03 S_Transcript_103327:533-6463(+)
MEVGDKGSDDARPTYWLDACEEDDIIPCDLIGDFGNAGSDHSLFGGIDHILDTFQNGAVLPCHNGGMGINITPPSIAAEIITNNYKEVVVVNSSGTGNGSLCKEIQVENMNCDFEVHNNSFNGGVKMDVDTNADHCDGRNCLVDDTDTCKVNGVVKDGNNLSDRERESEERNGKRSRVSGGYIYRDERSYSSRGQNGSRDWVSSNGRKRGRDWDDNNARRDRDRDRERGDLSSGSSRRREYYNGRRESRDREWREREVKGYWERERPGSREIVYRSGSYEVDWNRVGNKMEFEKDRECNGIVEKNDVSHGEKNLEEQARQYQLDVLEQAKQKNTIAFLETGAGKTLIAVLLIKSICNRLQQQDKKLLAVFLVPKVPLVYQQAEVIRDQTGYNVGHYCGEMGQDFWDTRRWQREFETKQVLVMTAQILLNILRHSIIKMDLIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPTVFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSIVCTIKDRKELEKHVPTPSEIVVEYDKAATLWSLHEQIKQMELAVEEAARASSRKSKWQFMGARDAGAREELRQVYGVSERTESDGAANLIQKLRAINYALSELGQWCAYKVAQSFLVALQNDERSNYQLDVKFQESYLSKVVTLLQCQLSEGAASNKDENGVIEDSGCPQHHNVDDIEEGELPDCHVVSGGEHVDVVIGAAVADGKVTPKVQSLIKILMGYQHTEDFRAIIFVERVVSALVLPKVFAELPSLSFVKCASLIGHNNSQEMRTSQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVEMGNVSHETFLKNARNSEETLRREAIERTDVSHLKGSSRLISVDAGPGSVYQVASTGATVSLNSAVGLIHFYCSQLPSDRYSILRPEFFMERHENPGGAIEYSCRLQLPCNAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEDGEKVEQNDEGDPLPGTARHREFYPEGVASILRGEWILSGRDVCDNSKLFHLYVYAVKWENIGFSKDPFLTQVSDFAVLFGNELDAEVLSMSMDLFIARTMKCKVSLVFQGSIDITKSQLASLKSFHVRLMSIVLDVDVEPQTTPWDPAKAYLFVPMVGDKSLDPLGEINWNLIEYIKKADAWTNPLQRARPDVYLGTNERSLGGDRREYGFGKLRYGMAFGQKSHPTYGIRGAIAQYDVVKASGLILKRDDILDDNLDISEGKLMLADTCISAEDLVGKIVTAAHSGKRFYVDSVRYDMTAENSFPRKEGYLGPLEYSSYEDYYKQKYGVELIYKQQPLLRGRGVSYCKNLLSPRFEHSDEPEGESEEILDKTYYVFLPAELCFVHPLPGMLVRGAQRLPSIMRRVESMLLAIELKNIISYPVPASKILEALTAASCQETFCYERAELLGDAYLKWVVSRYLFLRYPQKHEGQLTRMRQQMVSNMVLYQHALNKGLQSYIQADRFAPSRWAAPGVLPVFDEDSKEEESSLFDQEKSAAQANMANDSDDFDDDEMEDGEVESDSSSYRVLSSKTLADVVEALIGVYYVEGGKSAANHLMKWIGIDIEYNPEEIECPNRVTNVPDGVLRSVDFEALEGALKIKFSDRTLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHLHLRHGSTALEKQIRDFVKEVQEELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRDTTIVWRVFEPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLATVEVYVDGVQIGVAQNAQKKMAQKLAARNALLVLKEKEEAEAKDKAEESQKKKKNGGQTFTRQTLNDICLRRNWPMPLYRCVNEGGPAHAKRFTFAVRVNTTDRGWTDECIGEPMPSVKKAKDSAATLLLELLNKWYS*

Click here to download the sequence:
Link to NCBI Protein BLAST