Transcript Information: S_Transcript_103541.p1


Annotated TAIR IDAT5G62460.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25075545-25077072 | Forward length=307
E-Value4E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.096840839923
Replicate 227.622612526008
Replicate 342.860918658288
Condition 2: 8 Hour
Replicate 116.121995079753
Replicate 221.476974694137
Replicate 317.990575378604
Condition 3: 24 Hour
Replicate 115.553557045303
Replicate 29.5188008620659
Replicate 313.01457491304


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103541.p1 GENE.S_Transcript_103541~~S_Transcript_103541.p1 ORF type:3prime_partial len:250 (+),score=47.56,DUF3675|PF12428.4|1.1e-26,RINGv|PF12906.3|6.7e-13 S_Transcript_103541:222-968(+)
ATGGTGAATGATTTCATGGTTTGCGTAGATAGAATAATAGCTTCAGCCTGTTTACATTCTGTCAATGAACAACAACAAGGTGAGCCCAATTCTCACAACACAGAAAGTGGGAAATTGTTATTACTTCAAAGTGAGAAAAAAGCAAGTGAAAGTGTTGATTGTTCAACAAATGAAGGAGAAGGGAGTTCAAAGAAGAAAGAAGTGAGAGAGTGTAGGATTTGTCAAGAAGAAGATGATGAACTCTCCTTGGAATCCCCTTGTGCTTGTAATGGCACTTTAAAGTTTGCTCATAGGATGTGCATTCAGAAATGGTGCAACAAAAAAGGTGATATCACCTGTGAGATATGCAACCAGGTCTTCTCACCCGACTATTCGGTCCCCCCTCCTCGGCCTAATCCTGATGTCTTGACAGTTGATATCAGGCAAGCTTGGGGTCATCACTTTGGTTTCCGTGACCATGAACTGCTGGCGCTGGCTGCTGCTGAGCGTCGATTACTGGAATCAGAATACGATGAGTATGCCGCTGCCACTGCTGGCAATGTTACTTGCTTACGCTCAGTTGCTATCATTTTAATGTTTGTCTTGTTGATTCACCAAGTGTTGATGATTACTAGAGATTTTGGATTGATGCAAGGGTACTCGACCTTCTTTCATTTTCAGGTTTCTGTCCTTCAGCTTGCTGGTTTTCTTCTTCCATGTTTTGTCCTGGTCCGCTCATGGTACATTTTACACACCAGGAGGAGGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103541.p1 GENE.S_Transcript_103541~~S_Transcript_103541.p1 ORF type:3prime_partial len:250 (+),score=47.56,DUF3675|PF12428.4|1.1e-26,RINGv|PF12906.3|6.7e-13 S_Transcript_103541:222-968(+)
MVNDFMVCVDRIIASACLHSVNEQQQGEPNSHNTESGKLLLLQSEKKASESVDCSTNEGEGSSKKKEVRECRICQEEDDELSLESPCACNGTLKFAHRMCIQKWCNKKGDITCEICNQVFSPDYSVPPPRPNPDVLTVDIRQAWGHHFGFRDHELLALAAAERRLLESEYDEYAAATAGNVTCLRSVAIILMFVLLIHQVLMITRDFGLMQGYSTFFHFQVSVLQLAGFLLPCFVLVRSWYILHTRRRR

Click here to download the sequence:
Link to NCBI Protein BLAST