Transcript Information: S_Transcript_103637.p1


Annotated TAIR IDAT3G04240.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)SEC
Annotation TypeHomolog
Chromosome Positionchr3:1114187-1120722 | Reverse length=977
E-Value8E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2587348451241
Replicate 23.4219836864717
Replicate 32.6346765833715
Condition 2: 8 Hour
Replicate 12.7853571026459
Replicate 24.3830560600281
Replicate 33.3061314652624
Condition 3: 24 Hour
Replicate 13.0315348517559
Replicate 22.2201284809483
Replicate 34.1178848008353


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103637.p1 GENE.S_Transcript_103637~~S_Transcript_103637.p1 ORF type:3prime_partial len:245 (+),score=49.79,TPR_11|PF13414.2|1.3e-08,TPR_11|PF13414.2|1.7,TPR_11|PF13414.2|78,TPR_1|PF00515.24|0.43,TPR_1|PF00515.24|6.7e-05,TPR_1|PF00515.24|3.2e+02,TPR_1|PF00515.24|8.6,TPR_1|PF00515.24|8.9e+02,TPR_2|PF07719.13|0.86,TPR_2|PF07719.13|0.0004,TPR_2|PF07719.13|3.9e+02,TPR_2|PF07719.13|1.5e+02,TPR_2|PF07719.13|5.9e+03,TPR_8|PF13181.2|19,TPR_8|PF13181.2|0.0015,TPR_8|PF13181.2|6.1e+02,TPR_8|PF13181.2|6e+02,TPR_8|PF13181.2|7.8e+03,TPR_16|PF13432.2|0.00083,TPR_16|PF13432.2|2e+02,TPR_16|PF13432.2|3.9e+03 S_Transcript_103637:64-795(+)
ATGGCATCAATTGGTGTGACGAGTTGCCAAAGCCAAAGCCACAGCCATAGCACAAGTGATAATGATGAAGATCCACTGACAAGAGCCTGGAAAGCCACCGATGAACTGTACAGTATCCGGGACACCTTTTACCCATCAAACCCAGATGACAAAATCTCCAAATTACAACAAAAATCCAGTTGGTGTCTCGACCTACTTGATTCCATCCCACCTGAATTTAGAAAATCTGCTATGCAACGTGCAACTTATGAACATCTGAAAGGGAAGATATTGGATGTGTTTCCAGACTATAGGAAAGAGGCAGAAGATCATCTTTCAAAAGCGGTTAAGTTAAATCCATCTCTCACAGATGCTTGGCTATCTCTAGGGAACTGCTTCTGGAAGAAAGGAGATTTAGTATCAGCAAAGAACTGTTTCACCCGCGCATTGAGCAAGGGTCCAGAGAAAAGCATATTGTGTCAATTGTCAATGCTGGAAAGGAAAATGGCTCAAGGTAGTGAGAATCAAGCGGAAATTGTTGAGGAGAGCATTCAGCATGCAAAGGAAGCTATAACTTTAGATGTGGCAGATGGGAATTCTTGGTATAACCTTGGTAATGCATGCCTTACAAGCTTTTTTGTGACGGGATCTTGGGATCACTCAAAACTTTCTCAGTCGTTGAAAGCTTACCAAAATGCTGAGAAAGACAAAAAGATGAAGCATAATCCTGATTTGTTCTTCAACTGTGCAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103637.p1 GENE.S_Transcript_103637~~S_Transcript_103637.p1 ORF type:3prime_partial len:245 (+),score=49.79,TPR_11|PF13414.2|1.3e-08,TPR_11|PF13414.2|1.7,TPR_11|PF13414.2|78,TPR_1|PF00515.24|0.43,TPR_1|PF00515.24|6.7e-05,TPR_1|PF00515.24|3.2e+02,TPR_1|PF00515.24|8.6,TPR_1|PF00515.24|8.9e+02,TPR_2|PF07719.13|0.86,TPR_2|PF07719.13|0.0004,TPR_2|PF07719.13|3.9e+02,TPR_2|PF07719.13|1.5e+02,TPR_2|PF07719.13|5.9e+03,TPR_8|PF13181.2|19,TPR_8|PF13181.2|0.0015,TPR_8|PF13181.2|6.1e+02,TPR_8|PF13181.2|6e+02,TPR_8|PF13181.2|7.8e+03,TPR_16|PF13432.2|0.00083,TPR_16|PF13432.2|2e+02,TPR_16|PF13432.2|3.9e+03 S_Transcript_103637:64-795(+)
MASIGVTSCQSQSHSHSTSDNDEDPLTRAWKATDELYSIRDTFYPSNPDDKISKLQQKSSWCLDLLDSIPPEFRKSAMQRATYEHLKGKILDVFPDYRKEAEDHLSKAVKLNPSLTDAWLSLGNCFWKKGDLVSAKNCFTRALSKGPEKSILCQLSMLERKMAQGSENQAEIVEESIQHAKEAITLDVADGNSWYNLGNACLTSFFVTGSWDHSKLSQSLKAYQNAEKDKKMKHNPDLFFNCAT

Click here to download the sequence:
Link to NCBI Protein BLAST