Transcript Information: S_Transcript_103649.p1


Annotated TAIR IDAT1G07590.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2336649-2338481 | Reverse length=534
E-Value7.4E-244
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3339490748549
Replicate 25.3628102549183
Replicate 33.7750589851293
Condition 2: 8 Hour
Replicate 17.3661262929116
Replicate 26.5827614334377
Replicate 36.6810865627554
Condition 3: 24 Hour
Replicate 15.9153522458539
Replicate 24.6873981298629
Replicate 36.18450982215


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103649.p1 GENE.S_Transcript_103649~~S_Transcript_103649.p1 ORF type:complete len:469 (+),score=79.91,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|52,PPR_2|PF13041.2|0.0041,PPR_2|PF13041.2|3.4e-08,PPR_2|PF13041.2|9.7,PPR_2|PF13041.2|4e-11,PPR_2|PF13041.2|6.1e+02,PPR_2|PF13041.2|0.00049,PPR_2|PF13041.2|1e+03,PPR_3|PF13812.2|6.4e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|6.6,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|12,PPR|PF01535.16|3.6,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|16,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.94,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|4.9,PPR|PF01535.16|0.083,PPR|PF01535.16|3.8,PPR_1|PF12854.3|45,PPR_1|PF12854.3|44,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.96,PPR_1|PF12854.3|0.0078,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|76,PPR_1|PF12854.3|6.1e+03 S_Transcript_103649:550-1956(+)
ATGCTGTCTACGAGGATAGAGAGATTTCCAAGAGGAGAGGCAGTTGGTAGTGTATTTCAGAGATGGATGGGTGAGGGTTTTCCTGTTCATAGGGGTGATATTTTCCATGCTATCAACCGTTTAAGAAAGCTCAAGCTCAATAAACGTGCTCTTGAGGTAATGGAATGGGTGATCAGGGAGAAACCATATCGGCCAAAGGAGCTGGATTATTCTTACTTGCTGGAGTTTACCATTAAACTTCATGGTATATCACATGGTGAGAAACTGTTCTCTAATGTTCCTGCTGAATTCCAGAATGACTTATTATACAACAATCTTGTGATTGCATGCTTGGATAAAGGAGTGATCAGACTTTCATTGGATTACATGAAGAAAATGAGGGAATTGGGGCATCCTATTTCGTATCTTGTCTTCAACAGTTTGATTATTCTGCATTCCTCTCCTGGGCGTAGGAAAATGATTCCCAAGATACTCGCTCAGATGAAGGCCGATAAAGTTGCTCCACATGTTTCTACTTTCAACATCCTCTTGAAGATAGAAGCCAATGACCACAATATTGATGGACTGATGAAAGTCTTCAGTAACATGAAACAGGCAAATGTTGATCCCAATGAGATTACATACTGCATTCTAGCAACTGCACATGCAGTTGCAAGGTTGTATGCTGTGTGCGAGACGTATGTTGAGGCTGTGGAGAAGTCAAGAACAGGGAATAATTGGTCAACATTTGATGTCCTTATCATTTTGTATGGGTATTTGGGGAAGGCAAAGGAGCTAGAGAGAACTTGGGGCATTGTGCAAGAATTCCCTCATATTAGGACAAAGAGTTTCTTGTTGACAATAGAAGCATTTGGTAGAATTGGACTACTGAATCGTGCTGAAGAACTTTGGGAAGAAGTGAAGTCTAGGAAGGGTTTGAAATCAACAGAACAGTATAATGCCATAATCTCGGTCTATTCCAAGCACGGTCTGATTGAAAAGATTTTAGGGCTCTTTAGGGAGATGAAAATGAATGGATGCAAGCCGAATGCGATAACCTATAGGCATCTTGCTTTGGGATGCTTAAAAGCTGGATTAGTAAAGGAAGCATTAAGGACATTAGAAATGGGATCAAAGCAAACCGCAAGCAGTAGTATTAAACGGTCAAGCCCCTGGCTAGAGACTACCCTTTCAATTGTTGAGATACTTGCAGAGAGTGGGGATGTAGAGAATGCAGAGAAACTGTTTGATGAGCTGAAGGAAGCCAACTATACCAGGTATACATTTGTGTACAATGCATTGATCAAAGCCTATGTTAGGGCCAAGATTTATTGTCCAAATCTTTTGCGAAGGACGATTCTTGGAGGAAGTAGACCAGATTCTGAAACCTATAGTTTGGTAAAGCTAGTTGAGCAGTTTAGAACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103649.p1 GENE.S_Transcript_103649~~S_Transcript_103649.p1 ORF type:complete len:469 (+),score=79.91,PPR_2|PF13041.2|1.1e+04,PPR_2|PF13041.2|52,PPR_2|PF13041.2|0.0041,PPR_2|PF13041.2|3.4e-08,PPR_2|PF13041.2|9.7,PPR_2|PF13041.2|4e-11,PPR_2|PF13041.2|6.1e+02,PPR_2|PF13041.2|0.00049,PPR_2|PF13041.2|1e+03,PPR_3|PF13812.2|6.4e+02,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|2.8e+03,PPR_3|PF13812.2|6.6,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|12,PPR|PF01535.16|3.6,PPR|PF01535.16|7.6e+03,PPR|PF01535.16|16,PPR|PF01535.16|1.9e+03,PPR|PF01535.16|0.94,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|4.9,PPR|PF01535.16|0.083,PPR|PF01535.16|3.8,PPR_1|PF12854.3|45,PPR_1|PF12854.3|44,PPR_1|PF12854.3|11,PPR_1|PF12854.3|0.96,PPR_1|PF12854.3|0.0078,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|76,PPR_1|PF12854.3|6.1e+03 S_Transcript_103649:550-1956(+)
MLSTRIERFPRGEAVGSVFQRWMGEGFPVHRGDIFHAINRLRKLKLNKRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGISHGEKLFSNVPAEFQNDLLYNNLVIACLDKGVIRLSLDYMKKMRELGHPISYLVFNSLIILHSSPGRRKMIPKILAQMKADKVAPHVSTFNILLKIEANDHNIDGLMKVFSNMKQANVDPNEITYCILATAHAVARLYAVCETYVEAVEKSRTGNNWSTFDVLIILYGYLGKAKELERTWGIVQEFPHIRTKSFLLTIEAFGRIGLLNRAEELWEEVKSRKGLKSTEQYNAIISVYSKHGLIEKILGLFREMKMNGCKPNAITYRHLALGCLKAGLVKEALRTLEMGSKQTASSSIKRSSPWLETTLSIVEILAESGDVENAEKLFDELKEANYTRYTFVYNALIKAYVRAKIYCPNLLRRTILGGSRPDSETYSLVKLVEQFRT*

Click here to download the sequence:
Link to NCBI Protein BLAST