Transcript Information: S_Transcript_103652.p1


Annotated TAIR IDAT1G07590.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2336649-2338481 | Reverse length=534
E-Value6E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60899316327644
Replicate 21.2621733156473
Replicate 32.2367620421758
Condition 2: 8 Hour
Replicate 10.29279712105903
Replicate 20
Replicate 30.48777683306594
Condition 3: 24 Hour
Replicate 10
Replicate 20.82979630485482
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103652.p1 GENE.S_Transcript_103652~~S_Transcript_103652.p1 ORF type:complete len:437 (+),score=73.20,PPR_2|PF13041.2|9.8e+03,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|8.9,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|0.00044,PPR_2|PF13041.2|9.5e+02,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|6,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|11,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|7e+03,PPR|PF01535.16|14,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.86,PPR|PF01535.16|9.7e-08,PPR|PF01535.16|4.5,PPR|PF01535.16|0.076,PPR|PF01535.16|3.5,PPR_1|PF12854.3|41,PPR_1|PF12854.3|40,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|70,PPR_1|PF12854.3|5.7e+03 S_Transcript_103652:550-1860(+)
ATGCTGTCTACGAGGATAGAGAGATTTCCAAGAGGAGAGGCAGTTGGTAGTGTATTTCAGAGATGGATGGGTGAGGGTTTTCCTGTTCATAGGGGTGATATTTTCCATGCTATCAACCGTTTAAGAAAGCTCAAGCTCAATAAACGTGCTCTTGAGGTAATGGAATGGGTGATCAGGGAGAAACCATATCGGCCAAAGGAGCTGGATTATTCTTACTTGCTGGAGTTTACCATTAAACTTCATGGAGTGATCAGACTTTCATTGGATTACATGAAGAAAATGAGGGAATTGGGGCATCCTATTTCGTATCTTGTCTTCAACAGTTTGATTATTCTGCATTCCTCTCCTGGGCGTAGGAAAATGATTCCCAAGATACTCGCTCAGATGAAGGCCGATAAAGTTGCTCCACATGTTTCTACTTTCAACATCCTCTTGAAGATAGAAGCCAATGACCACAATATTGATGGACTGATGAAAGTCTTCAGTAACATGAAACAGGCAAATGTTGATCCCAATGAGATTACATACTGCATTCTAGCAACTGCACATGCAGTTGCAAGGTTGTATGCTGTGTGCGAGACGTATGTTGAGGCTGTGGAGAAGTCAAGAACAGGGAATAATTGGTCAACATTTGATGTCCTTATCATTTTGTATGGGTATTTGGGGAAGGCAAAGGAGCTAGAGAGAACTTGGGGCATTGTGCAAGAATTCCCTCATATTAGGACAAAGAGTTTCTTGTTGACAATAGAAGCATTTGGTAGAATTGGACTACTGAATCGTGCTGAAGAACTTTGGGAAGAAGTGAAGTCTAGGAAGGGTTTGAAATCAACAGAACAGTATAATGCCATAATCTCGGTCTATTCCAAGCACGGTCTGATTGAAAAGATTTTAGGGCTCTTTAGGGAGATGAAAATGAATGGATGCAAGCCGAATGCGATAACCTATAGGCATCTTGCTTTGGGATGCTTAAAAGCTGGATTAGTAAAGGAAGCATTAAGGACATTAGAAATGGGATCAAAGCAAACCGCAAGCAGTAGTATTAAACGGTCAAGCCCCTGGCTAGAGACTACCCTTTCAATTGTTGAGATACTTGCAGAGAGTGGGGATGTAGAGAATGCAGAGAAACTGTTTGATGAGCTGAAGGAAGCCAACTATACCAGGTATACATTTGTGTACAATGCATTGATCAAAGCCTATGTTAGGGCCAAGATTTATTGTCCAAATCTTTTGCGAAGGACGATTCTTGGAGGAAGTAGACCAGATTCTGAAACCTATAGTTTGGTAAAGCTAGTTGAGCAGTTTAGAACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103652.p1 GENE.S_Transcript_103652~~S_Transcript_103652.p1 ORF type:complete len:437 (+),score=73.20,PPR_2|PF13041.2|9.8e+03,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|3.1e-08,PPR_2|PF13041.2|1.6e+04,PPR_2|PF13041.2|8.9,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|0.00044,PPR_2|PF13041.2|9.5e+02,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|0.0015,PPR_3|PF13812.2|2.5e+03,PPR_3|PF13812.2|6,PPR_3|PF13812.2|0.019,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|11,PPR|PF01535.16|9.6e+02,PPR|PF01535.16|7e+03,PPR|PF01535.16|14,PPR|PF01535.16|1.4e+04,PPR|PF01535.16|1.8e+03,PPR|PF01535.16|0.86,PPR|PF01535.16|9.7e-08,PPR|PF01535.16|4.5,PPR|PF01535.16|0.076,PPR|PF01535.16|3.5,PPR_1|PF12854.3|41,PPR_1|PF12854.3|40,PPR_1|PF12854.3|10,PPR_1|PF12854.3|0.88,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|70,PPR_1|PF12854.3|5.7e+03 S_Transcript_103652:550-1860(+)
MLSTRIERFPRGEAVGSVFQRWMGEGFPVHRGDIFHAINRLRKLKLNKRALEVMEWVIREKPYRPKELDYSYLLEFTIKLHGVIRLSLDYMKKMRELGHPISYLVFNSLIILHSSPGRRKMIPKILAQMKADKVAPHVSTFNILLKIEANDHNIDGLMKVFSNMKQANVDPNEITYCILATAHAVARLYAVCETYVEAVEKSRTGNNWSTFDVLIILYGYLGKAKELERTWGIVQEFPHIRTKSFLLTIEAFGRIGLLNRAEELWEEVKSRKGLKSTEQYNAIISVYSKHGLIEKILGLFREMKMNGCKPNAITYRHLALGCLKAGLVKEALRTLEMGSKQTASSSIKRSSPWLETTLSIVEILAESGDVENAEKLFDELKEANYTRYTFVYNALIKAYVRAKIYCPNLLRRTILGGSRPDSETYSLVKLVEQFRT*

Click here to download the sequence:
Link to NCBI Protein BLAST