Transcript Information: S_Transcript_103771.p1


Annotated TAIR IDAT2G19910.1
Annotated Gene NameRNA-dependent RNA polymerase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:8595820-8600757 | Reverse length=992
E-Value6.4E-239
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9439537939278
Replicate 21.3619005899701
Replicate 31.9543228565955
Condition 2: 8 Hour
Replicate 13.3787141037433
Replicate 22.9460870636677
Replicate 33.4429918456606
Condition 3: 24 Hour
Replicate 11.8428811175193
Replicate 22.051867714731
Replicate 31.790453769499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103771.p1 GENE.S_Transcript_103771~~S_Transcript_103771.p1 ORF type:5prime_partial len:972 (+),score=187.66,RdRP|PF05183.8|6.2e-121 S_Transcript_103771:3-2918(+)
CTCAAAGAGCGGGAAAAGGAAACTCTGCACTTTCTTTCTCTCTCATTCTCATTAATTTGTCTTTCAAATTTTGAACCAAAAAGATCAATCAATCAAACTATGAGCGATCAACGGGGACAAACAACAACTCAGCTACCGGCGCCGGTGGAAGACCTACTTCAGGCGATACACCGTGAGAAATCGACGCCGCTGGCCGACGAAGGTGCTCGGATAAAACTGGCGAAAATCGGCCAAGTAGAATCGGTGAGACTTCTTACAGATATTCGGAGTTGGAGTACGGTGACGAATTTAAGCGCTTCGATAATGAGCAGGGCGAAGAAGTTGATGATGATGAAGAATCCTCGCTCTTCTTATCTGACACCTCCACCACCTCTCTCTCCTAGTAGTACCAGTAGTCGTTCTTCTCTCTCTCCTCAACCTCGGGTTTTCACTTCGCCTGTTTCTGTCACCAGTAGTCCTCAACATGAAGGAAATTCGTCAACTCCAAATAAACGAAGGAAGACCTTAAACTTTTCTGATGAGATAGTTGAATCATTTTGGGAACATTTTACGGGCATGCCTACGGCTAGTACGAGTGAGCCAAATGATGATTTTATGTCCATCCCTGATTGTCCTCTAGATGCCCTTGCTGAACTTGAGTTTAGAAAGGCTTTTCTTATTTTGAATTACATTGGAAGGGAGAAGCTGGAGGATGTTCTTACTGCTGAACAAATTCGAAGCTTTAAAAATTTTGAGAAAATGGATAGATTTGAGGCTGAAATTTGGAATGCATTTGGCCGAGAAAACTGCAAGGGAAATGAACGGAGGAAGTACCTTGACTGGGATTTAGGAAGGCATTACAACTATCAGTGTCATGTTTATGCAGATGGAAGCTGTAGTTTCAAGGGTCCATTTTTGAACAAGACTACCACCGTCTTACAAAAAGTAGTCAAGGATGAAAATGTACTGATTGTCAAGTTTGCAGAGGAAGAAACTGATGGACTAGATATAGACTCAGGTTCTGGCATTAACAAGGTTTTCGAAGAAGGAATATTTGTTGGTCGGAAGCGCTACCAGTTCTTTGTATTTAAAGATGGAGGAAAGGAGGAGAAGAAGAAGTGTCCTACTTCTAGTCCAGTAAAATGCTACTTTGTTTGTATGGAGGCATTTGCCAGCTTCTTTGCAAAGGGACCTCAGTTTTTTAAGAAAAGATCAATTCAGGAAGCAAGGTCGATATTTATGCACATACATAAAGCCGACAGTCTGTCCAAATACATGGCCAGGTTTTCCCTTATATTATCAAAAACTATTACATTGGAAGGTCTGGATGATGTGGTTGTTGAAGTTGTTCCTGATAAGCCTTGCCTGGATGAACATAAAAATCCGGTTTATGATAAAGAGAATAAGCTTTGCATACTTACTGATGGAACTGGATTTATCTCTGAAGATCTTGCTTTAAAATGTCCCCAAAATTGTTTTAAGGGCAGTGTTCCTGATGATAGCTACCTTCAGAGATCAGTAGATGCAGTCCCTTCATCACAACAACTTGCAACATTAAACCAACTGAAATTACACGCTTGTGAACCGCCACTCTTGATACAATTTCGCATGTTCCATCAAGGCCAAGCGATCAAGGGAACTGTTCTTGTTAACAAAACGCTTCCTGACAAAACAATTGTGGTTCGCGATTCAATGCTGAAGATTGAAACTGATGAAGAGCTGGAAGGTGCTCCTTCTGTGAATCGATTTGAGATTGTGGGGACTAGCAACAAACCAAAGCAACCTCGGCTATCGAAGAACTTGATCGCACTTCTTCATTATGGAGGTGTTCCAAAGGAATTTTTTCTGGCTTTACTGTCTAATGCTCTCAGAAAGACAGAGTCTGTTCTGACTAAAAGACGAGCAGCGCTTAAAGTTGCCAGTAGCCGAGATGCTGATGATGACTTTACCATTTCGAGGATGATTTTATCTGGAATTCCCCTTGATGAACCTTTTCTCCAACACCGCTTGACTGTCATTGCTAAGGATGAAAAGAGGAATCTCAAAGCTGGAAAACTTCCTATTAGTGATAGTTTCTACGTAATGGGAACAGCTGATCCTACCGGCACTCTGAACAGTGGAGAAGTTTGTGTAATTCTAGAACATGGGCATATTTCTGGAAAAGTACTTGTGTACAGAAATCCTGGCATTCACCCTGGAGATATACATGTTGTGGAGGCCGTTTATGTGGAGTCTTTGAAAGATTTTGTGGGCAATTCTAAATATGGCATATTCTTTCCATCAAAGGGATCAAGATCAATGGCAGATGAAATTGCTGGGGGTGATTATGATGGAGACATGTATTGGGTGTCTCAAAACCCTCAGCTTCTCGAGTACTTCATACCAAGTGAGGTCTGGGTTTGCAGTTCCTCTTCTCCCAGTGCAGCCAGCAAAGATCCTAGCAAGCTATCAGATCAGGAGTTGGAGCGGGAGCTTTTCCGCTTGTACTTGACTGCAAGGTTTCGGCCAAGCAAAGCAATGAGTCTTGCAGCTGATTGTTGGCTTGTCTTTATGGATCGACTCTTGACATTGGGAGATGACTGCTTAGAGGAAAAAGAGCGGCTGAAGCAAAAGATTTTTAAGCTGATTGATAAATATTATGATGCTCTTGATGCACCAAAGAAAGGGAAGAAGGTGGAAATTCCACAAGACTTGGTACCAGAAAAATATCCCCACCATATGGAGAGAGGCGAGCTTAACACTTACAAATCATCTTCCATTTTGGGCAAGATATATGATGAAGTGGATAGATTTAATGAGCATGATCCAATAAAAGGTGCGAGTATCTTAGAGCAGTATGGATCTGTTGTTTATGGCTTACAGGGGAGTGTACTTGTTTTATTTCTGTTAAAATTCACATATGGTATAGCCTTTTTGTGGGTTTGTAGGTTTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103771.p1 GENE.S_Transcript_103771~~S_Transcript_103771.p1 ORF type:5prime_partial len:972 (+),score=187.66,RdRP|PF05183.8|6.2e-121 S_Transcript_103771:3-2918(+)
LKEREKETLHFLSLSFSLICLSNFEPKRSINQTMSDQRGQTTTQLPAPVEDLLQAIHREKSTPLADEGARIKLAKIGQVESVRLLTDIRSWSTVTNLSASIMSRAKKLMMMKNPRSSYLTPPPPLSPSSTSSRSSLSPQPRVFTSPVSVTSSPQHEGNSSTPNKRRKTLNFSDEIVESFWEHFTGMPTASTSEPNDDFMSIPDCPLDALAELEFRKAFLILNYIGREKLEDVLTAEQIRSFKNFEKMDRFEAEIWNAFGRENCKGNERRKYLDWDLGRHYNYQCHVYADGSCSFKGPFLNKTTTVLQKVVKDENVLIVKFAEEETDGLDIDSGSGINKVFEEGIFVGRKRYQFFVFKDGGKEEKKKCPTSSPVKCYFVCMEAFASFFAKGPQFFKKRSIQEARSIFMHIHKADSLSKYMARFSLILSKTITLEGLDDVVVEVVPDKPCLDEHKNPVYDKENKLCILTDGTGFISEDLALKCPQNCFKGSVPDDSYLQRSVDAVPSSQQLATLNQLKLHACEPPLLIQFRMFHQGQAIKGTVLVNKTLPDKTIVVRDSMLKIETDEELEGAPSVNRFEIVGTSNKPKQPRLSKNLIALLHYGGVPKEFFLALLSNALRKTESVLTKRRAALKVASSRDADDDFTISRMILSGIPLDEPFLQHRLTVIAKDEKRNLKAGKLPISDSFYVMGTADPTGTLNSGEVCVILEHGHISGKVLVYRNPGIHPGDIHVVEAVYVESLKDFVGNSKYGIFFPSKGSRSMADEIAGGDYDGDMYWVSQNPQLLEYFIPSEVWVCSSSSPSAASKDPSKLSDQELERELFRLYLTARFRPSKAMSLAADCWLVFMDRLLTLGDDCLEEKERLKQKIFKLIDKYYDALDAPKKGKKVEIPQDLVPEKYPHHMERGELNTYKSSSILGKIYDEVDRFNEHDPIKGASILEQYGSVVYGLQGSVLVLFLLKFTYGIAFLWVCRFQ*

Click here to download the sequence:
Link to NCBI Protein BLAST