Transcript Information: S_Transcript_103790.p1


Annotated TAIR IDAT1G54690.1
Annotated Gene Namegamma histone variant H2AX
Annotated Gene Symbol(s)HTA3, H2AXB, G-H2AX, GAMMA-H2AX
Annotation TypeOrtholog
Chromosome Positionchr1:20414607-20415206 | Reverse length=142
E-Value2.9E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.396891877721
Replicate 230.234193097335
Replicate 328.461012474692
Condition 2: 8 Hour
Replicate 130.145150510021
Replicate 242.257936319484
Replicate 352.500143175232
Condition 3: 24 Hour
Replicate 16.8770929507426
Replicate 224.90221271969
Replicate 326.623269094289


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103790.p1 GENE.S_Transcript_103790~~S_Transcript_103790.p1 ORF type:complete len:162 (+),score=34.47,Histone_H2A_C|PF16211.1|2e-16,Histone|PF00125.20|2.7e-14 S_Transcript_103790:48-488(+)
ATGGCCGGCAAAGATGGATCAGCAGCCAAAACCGGAGGCAGAGGAAAGCCCAAAGGAGCAGCCAAGTCAGTGTCTCGCTCCACCAAAGCGGGTCTCCAATTCCCAGTGGGTCGGATCGCCCGGTACTTGAAGAAGGGCCGTTATGCCCAGCGGGTCGGGTCGGGTTCCCCTGTTTACCTCTCTGCTGTTCTCGAGTACCTCGCTGCTGAGGTGTTGGAGCTTGCTGGGAATGCGGCAAGGGACAACAAGAAGACGAGGATAATTCCGAGGCATATACAGTTGGCGGTGAGGAACGACGAGGAGTTGAGCAAGTTGTTGGGGTCGGTGACGATTGCGAGTGGCGGAGTTTTGCCGAAGATTCACCAGGTTTTGATTGCTAAGAAGAGTAAGAGTGGTGGTGATAACAAGGGTGAAAAGGGCAGTCTTTCTCAAGAGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103790.p1 GENE.S_Transcript_103790~~S_Transcript_103790.p1 ORF type:complete len:162 (+),score=34.47,Histone_H2A_C|PF16211.1|2e-16,Histone|PF00125.20|2.7e-14 S_Transcript_103790:48-488(+)
MAGKDGSAAKTGGRGKPKGAAKSVSRSTKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELSKLLGSVTIASGGVLPKIHQVLIAKKSKSGGDNKGEKGSLSQEF*

Click here to download the sequence:
Link to NCBI Protein BLAST