Transcript Information: S_Transcript_103883.p2


Annotated TAIR IDAT3G16170.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5476490-5480128 | Forward length=544
E-Value7E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59470393821632
Replicate 21.4790696910066
Replicate 30.61819227095868
Condition 2: 8 Hour
Replicate 10
Replicate 21.4997887356241
Replicate 30.83358063259704
Condition 3: 24 Hour
Replicate 12.9289229261132
Replicate 21.2661347249356
Replicate 31.1272422080499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103883.p2 GENE.S_Transcript_103883~~S_Transcript_103883.p2 ORF type:complete len:179 (+),score=37.00,AMP-binding|PF00501.24|25,AMP-binding|PF00501.24|2.9e-06 S_Transcript_103883:272-808(+)
ATGACCTCATTTAAGACCCTCCACCAATTTTATACATTTAAAACTGCTCTTCTTCTGAAAAACCAATGCTCTTTCTTTCTTCCAACTCGAACCAGCTCCTCTCTCTGGACTTTTCACTCTCATTTCTTCTCAACATCAACATCGAGATCATTCATGGAGGTGGTCAAAGCTGTTGCTAAGCAAGGTTCTGCAGCAAGTAATAGTATTGCTTTACAAGCCGATAGAAAAAGTTACAGCTATAGCCAACTCATCTTGTCTGCACAAAGGATATCTAGTCTTTTGTGTACTGGTGACACAAGAAGCACTTCAGAAGGAATTAAACATGAAGATTCTTCGGTTTTGGTTGATGGCAACAAAGCCAGTGGATCTCTTGATGGAACTCGAGTTGGAATTGTTGCTAAACCTTCATCAGAGTTTGTTGCTGGTATTCTTGGGACCTGGTTGAGTGGAGGAGTAGCTGTGCCACTAGCACTTAGTTACCCAGAGGCCAAGCTGCTGCACGTGATGAATGGATGTTTCCATGGTGTTGAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103883.p2 GENE.S_Transcript_103883~~S_Transcript_103883.p2 ORF type:complete len:179 (+),score=37.00,AMP-binding|PF00501.24|25,AMP-binding|PF00501.24|2.9e-06 S_Transcript_103883:272-808(+)
MTSFKTLHQFYTFKTALLLKNQCSFFLPTRTSSSLWTFHSHFFSTSTSRSFMEVVKAVAKQGSAASNSIALQADRKSYSYSQLILSAQRISSLLCTGDTRSTSEGIKHEDSSVLVDGNKASGSLDGTRVGIVAKPSSEFVAGILGTWLSGGVAVPLALSYPEAKLLHVMNGCFHGVEY*

Click here to download the sequence:
Link to NCBI Protein BLAST