Transcript Information: S_Transcript_103884.p1


Annotated TAIR IDAT3G16170.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5476490-5480128 | Forward length=544
E-Value6E-146
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.675720734487
Replicate 20.47400524439973
Replicate 30.68439840935236
Condition 2: 8 Hour
Replicate 10.29155807074205
Replicate 21.0486804049872
Replicate 30.91591532677654
Condition 3: 24 Hour
Replicate 10.42665788067567
Replicate 20.13279577095516
Replicate 30.73892708218114


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103884.p1 GENE.S_Transcript_103884~~S_Transcript_103884.p1 ORF type:complete len:512 (+),score=85.51,AMP-binding|PF00501.24|1.3e+02,AMP-binding|PF00501.24|4.9e-70 S_Transcript_103884:272-1807(+)
ATGACCTCATTTAAGACCCTCCACCAATTTTATACATTTAAAACTGCTCTTCTTCTGAAAAACCAATGCTCTTTCTTTCTTCCAACTCGAACCAGCTCCTCTCTCTGGACTTTTCACTCTCATTTCTTCTCAACATCAACATCGAGATCATTCATGGAGGTGGTCAAAGCTGTTGCTAAGCAAGGTTCTGCAGCAAGTAATAGTATTGCTTTACAAGCCGATAGAAAAAGTTACAGCTATAGCCAACTCATCTTGTCTGCACAAAGGATATCTAGTCTTTTGTGTACTGGTGACACAAGAAGCACTTCAGAAGGAATTAAACATGAAGATTCTTCGGTTTTGGTTGATGGCAACAAAGCCAGTGGATCTCTTGATGGAACTCGAGTTGGAATTGTTGCTAAACCTTCATCAGAGTTTGTTGCTGGTATTCTTGGGACCTGGTTGAGTGGAGGAGTAGCTGTGCCACTAGCACTTAGTTACCCAGAGGCCGAGCTGCTGCACGTGATGAATGATTCGGATGTTTCCATGGTGTTGAGTACTGAAGATCATCAGAAGCTTATGAAAACCATTGCTGCTAAAAGTGCTGCTCAATTCTCGCTTATTCCTTCTGTTCCATGTATGACATCAGAGTCTACTGACGGTCATTCTGAGAGCGGAGAAAGTTTGAAGCCATTCGAAAACCCAACTAAGATATCAGGGGAGGAAGCAGCATTAATCATTTATACTAGCGGAACAACTGGTAAGCCTAAAGGAGTGGTTCATACTCACAGAAGTGTGTTGGCACAGGTCCAAATGTTGACAGATGCTTGGGCGTACGCTGCTGATGATCATTTTTTGCATTGTCTACCATTGCACCATGTTCATGGGCTTTTCAACGCTCTACTTGCTCCGCTATATGCAGGCGCCACAGTTGAATTTATGCCAAAATTTAGTGTCAGCGGTATCTGGCAGAGATGGCGTGAATCATACCCAAAGTACGGGACAACAGCTGATAGTGCAGTGACCGTGTTTACTGGAGTTCCAACAATGTACACTAGATTAATACAAGGTTATGAAGCAATGGAGCCTGATGTACAGACTGCGTCAGCCTCAGCTGCAAGCAAGTTGCGCCTCATGGTAATTGGCAATGCTCCATCATGGTTACTATTGCACAGAATGTGCGGTTCCTCTGCCCTACCTTATCCTGTTATGCAGCAGTGGGAAGCTATTACAGGTCATCGCCTTTTGGAGCGTTATGGCATGACTGAGTTTGTCATGGCAATTTCTAATCCCTTGCGAGGTTTGAGGAAAGGAGGCACAGTTGGCAAACCATTTCCTGGTGTAGAGGTAAAAATTATTTCAGAAGATACCATTGGAAATGAGACGACAGGCGTTGGCGAGCTTTGCGTTCGAAGTCCTTCACTTTTCAGGGAATACTGGAAATTGCCCGAGGCAAGTACTAGCAGTGACATGACTCTCCAAAATCAATTTGCAAATTTCTTTTTCCTTCCATGGCCTTCTATGAACATGAGGATGCCATTTCACAATGAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103884.p1 GENE.S_Transcript_103884~~S_Transcript_103884.p1 ORF type:complete len:512 (+),score=85.51,AMP-binding|PF00501.24|1.3e+02,AMP-binding|PF00501.24|4.9e-70 S_Transcript_103884:272-1807(+)
MTSFKTLHQFYTFKTALLLKNQCSFFLPTRTSSSLWTFHSHFFSTSTSRSFMEVVKAVAKQGSAASNSIALQADRKSYSYSQLILSAQRISSLLCTGDTRSTSEGIKHEDSSVLVDGNKASGSLDGTRVGIVAKPSSEFVAGILGTWLSGGVAVPLALSYPEAELLHVMNDSDVSMVLSTEDHQKLMKTIAAKSAAQFSLIPSVPCMTSESTDGHSESGESLKPFENPTKISGEEAALIIYTSGTTGKPKGVVHTHRSVLAQVQMLTDAWAYAADDHFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVSGIWQRWRESYPKYGTTADSAVTVFTGVPTMYTRLIQGYEAMEPDVQTASASAASKLRLMVIGNAPSWLLLHRMCGSSALPYPVMQQWEAITGHRLLERYGMTEFVMAISNPLRGLRKGGTVGKPFPGVEVKIISEDTIGNETTGVGELCVRSPSLFREYWKLPEASTSSDMTLQNQFANFFFLPWPSMNMRMPFHNEF*

Click here to download the sequence:
Link to NCBI Protein BLAST