Transcript Information: S_Transcript_103886.p1


Annotated TAIR IDAT3G16170.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5476490-5480128 | Forward length=544
E-Value5.5E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4735140454959
Replicate 26.1957148757405
Replicate 37.7055267198605
Condition 2: 8 Hour
Replicate 17.7414088137538
Replicate 29.5003740798839
Replicate 38.3219405033146
Condition 3: 24 Hour
Replicate 17.4811244830802
Replicate 27.1406529624108
Replicate 38.6376864401083


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103886.p1 GENE.S_Transcript_103886~~S_Transcript_103886.p1 ORF type:5prime_partial len:146 (+),score=14.16,AMP-binding|PF00501.24|7.5e-15 S_Transcript_103886:1-438(+)
GTTCATGGGCTTTTCAACGCTCTACTTGCTCCGCTATATGCAGGCGCCACAGTTGAATTTATGCCAAAATTTAGTGTCAGCGGTATCTGGCAGAGATGGCGTGAATCATACCCAAAGTACGGGACAACAGCTGATAGTGCAGTGACCGTGTTTACTGGAGTTCCAACAATGTACACTAGATTAATACAAGGTTATGAAGCAATGGAGCCTGATGTACAGACTGCGTCAGCCTCAGCTGCAAGCAAGTTGCGCCTCATGATGTGCGGTTCCTCTGCCCTACCTTATCCTGTTATGCAGCAGTGGGAAGCTATTACAGGTCATCGCCTTTTGGAGCGTTATGGCATGACTGAGGTAAGAAAATGTGGCTCTGTAGTTTACACTCCAATATTATGTACCATTACCTGGCTGGAGCTGGGACAGCTAGCAGAATCTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103886.p1 GENE.S_Transcript_103886~~S_Transcript_103886.p1 ORF type:5prime_partial len:146 (+),score=14.16,AMP-binding|PF00501.24|7.5e-15 S_Transcript_103886:1-438(+)
VHGLFNALLAPLYAGATVEFMPKFSVSGIWQRWRESYPKYGTTADSAVTVFTGVPTMYTRLIQGYEAMEPDVQTASASAASKLRLMMCGSSALPYPVMQQWEAITGHRLLERYGMTEVRKCGSVVYTPILCTITWLELGQLAESF*

Click here to download the sequence:
Link to NCBI Protein BLAST