Transcript Information: S_Transcript_103890.p1


Annotated TAIR IDAT3G16170.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5476490-5480128 | Forward length=544
E-Value5E-261
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.106646393441
Replicate 222.908647304129
Replicate 322.361080970372
Condition 2: 8 Hour
Replicate 131.136432507763
Replicate 230.126946331133
Replicate 332.722890652375
Condition 3: 24 Hour
Replicate 121.251651830306
Replicate 223.53271170068
Replicate 321.072091411942


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103890.p1 GENE.S_Transcript_103890~~S_Transcript_103890.p1 ORF type:complete len:626 (+),score=117.35,AMP-binding|PF00501.24|1.6e+02,AMP-binding|PF00501.24|6.5e-82,AMP-binding_C|PF13193.2|6.7e-19 S_Transcript_103890:272-2149(+)
ATGACCTCATTTAAGACCCTCCACCAATTTTATACATTTAAAACTGCTCTTCTTCTGAAAAACCAATGCTCTTTCTTTCTTCCAACTCGAACCAGCTCCTCTCTCTGGACTTTTCACTCTCATTTCTTCTCAACATCAACATCGAGATCATTCATGGAGGTGGTCAAAGCTGTTGCTAAGCAAGGTTCTGCAGCAAGTAATAGTATTGCTTTACAAGCCGATAGAAAAAGTTACAGCTATAGCCAACTCATCTTGTCTGCACAAAGGATATCTAGTCTTTTGTGTACTGGTGACACAAGAAGCACTTCAGAAGGAATTAAACATGAAGATTCTTCGGTTTTGGTTGATGGCAACAAAGCCAGTGGATCTCTTGATGGAACTCGAGTTGGAATTGTTGCTAAACCTTCATCAGAGTTTGTTGCTGGTATTCTTGGGACCTGGTTGAGTGGAGGAGTAGCTGTGCCACTAGCACTTAGTTACCCAGAGGCCGAGCTGCTGCACGTGATGAATGATTCGGATGTTTCCATGGTGTTGAGTACTGAAGATCATCAGAAGCTTATGAAAACCATTGCTGCTAAAAGTGCTGCTCAATTCTCGCTTATTCCTTCTGTTCCATGTATGACATCAGAGTCTACTGACGGTCATTCTGAGAGCGGAGAAAGTTTGAAGCCATTCGAAAACCCAACTAAGATATCAGGGGAGGAAGCAGCATTAATCATTTATACTAGCGGAACAACTGGTAAGCCTAAAGGAGTGGTTCATACTCACAGAAGTGTGTTGGCACAGGTCCAAATGTTGACAGATGCTTGGGCGTACGCTGCTGATGATCATTTTTTGCATTGTCTACCATTGCACCATGTTCATGGGCTTTTCAACGCTCTACTTGCTCCGCTATATGCAGGCGCCACAGTTGAATTTATGCCAAAATTTAGTGTCAGCGGTATCTGGCAGAGATGGCGTGAATCATACCCAAAGTACGGGACAACAGCTGATAGTGCAGTGACCGTGTTTACTGGAGTTCCAACAATGTACACTAGATTAATACAAGGTTATGAAGCAATGGAGCCTGATGTACAGACTGCGTCAGCCTCAGCTGCAAGCAAGTTGCGCCTCATGGTAATTGGCAATGCTCCATCATGGTTACTATTGCACAGAATGTGCGGTTCCTCTGCCCTACCTTATCCTGTTATGCAGCAGTGGGAAGCTATTACAGGTCATCGCCTTTTGGAGCGTTATGGCATGACTGAGTTTGTCATGGCAATTTCTAATCCCTTGCGAGGTTTGAGGAAAGGAGGCACAGTTGGCAAACCATTTCCTGGTGTAGAGGTAAAAATTATTTCAGAAGATACCATTGGAAATGAGACGACAGGCGTTGGCGAGCTTTGCGTTCGAAGTCCTTCACTTTTCAGGGAATACTGGAAATTGCCCGAGGTGACGAAAGAATCATTTACTGATGGTGGCTTCTTCAAGACAGGCGATGCTGTTACAGTGGATGAGGATGGTTGCTACATAATTTTAGGAAGGACTAGTGCTGATATTATGAAGGTTGGTGGCTACAAGTTATCTGCATTGGAAATTGAAGCAGCTCTTCTAGAGCATCCTACGGTATCAGAATGTTGTGTATTAGGGTTGCCAGACAAAACCTACGGAGAAGCTGTATGCGCAATCATTGTGCCACAGGAGGAGGTAAAGAGGAAACGACAAGAAGAGTTAAAACCTGCTATAACCCTGGAAGAACTCCGCTTATGGGCAAAAGAGAAGCTTGCTCCATACAAGCTACCAACACAACTGTATATCTGGGAAACTCTGCCTCGTAATGCTATGGGAAAGGTCAACAAGAAAGAGCTGAAGAAATCACTGGCTGCTGAAGGGCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103890.p1 GENE.S_Transcript_103890~~S_Transcript_103890.p1 ORF type:complete len:626 (+),score=117.35,AMP-binding|PF00501.24|1.6e+02,AMP-binding|PF00501.24|6.5e-82,AMP-binding_C|PF13193.2|6.7e-19 S_Transcript_103890:272-2149(+)
MTSFKTLHQFYTFKTALLLKNQCSFFLPTRTSSSLWTFHSHFFSTSTSRSFMEVVKAVAKQGSAASNSIALQADRKSYSYSQLILSAQRISSLLCTGDTRSTSEGIKHEDSSVLVDGNKASGSLDGTRVGIVAKPSSEFVAGILGTWLSGGVAVPLALSYPEAELLHVMNDSDVSMVLSTEDHQKLMKTIAAKSAAQFSLIPSVPCMTSESTDGHSESGESLKPFENPTKISGEEAALIIYTSGTTGKPKGVVHTHRSVLAQVQMLTDAWAYAADDHFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVSGIWQRWRESYPKYGTTADSAVTVFTGVPTMYTRLIQGYEAMEPDVQTASASAASKLRLMVIGNAPSWLLLHRMCGSSALPYPVMQQWEAITGHRLLERYGMTEFVMAISNPLRGLRKGGTVGKPFPGVEVKIISEDTIGNETTGVGELCVRSPSLFREYWKLPEVTKESFTDGGFFKTGDAVTVDEDGCYIILGRTSADIMKVGGYKLSALEIEAALLEHPTVSECCVLGLPDKTYGEAVCAIIVPQEEVKRKRQEELKPAITLEELRLWAKEKLAPYKLPTQLYIWETLPRNAMGKVNKKELKKSLAAEGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST