Transcript Information: S_Transcript_103930.p1


Annotated TAIR IDAT5G53180.1
Annotated Gene Namepolypyrimidine tract-binding protein 2
Annotated Gene Symbol(s)ATPTB2, PTB2
Annotation TypeOrtholog
Chromosome Positionchr5:21568393-21571537 | Reverse length=429
E-Value6E-232
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 149.490844402265
Replicate 240.883897316009
Replicate 344.084610375273
Condition 2: 8 Hour
Replicate 153.45377441334
Replicate 249.747926580445
Replicate 343.80032720585
Condition 3: 24 Hour
Replicate 146.180850186256
Replicate 242.941958776237
Replicate 345.576676732052


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_103930.p1 GENE.S_Transcript_103930~~S_Transcript_103930.p1 ORF type:complete len:456 (+),score=85.28,RRM_5|PF13893.2|0.00016,RRM_5|PF13893.2|0.0007,RRM_5|PF13893.2|1.3e-07,RRM_1|PF00076.18|2.7e-07,RRM_1|PF00076.18|0.0016,RRM_1|PF00076.18|0.00028,RRM_6|PF14259.2|3.7e-06,RRM_6|PF14259.2|0.38,RRM_6|PF14259.2|0.18 S_Transcript_103930:191-1558(+)
ATGGCGTCAGTGTCAAGCCAGCCACAGTTCCGATACACCCAACCGCCTTCAAAAGTACTTCATCTGAGGAACTTGCCTTGGGAATGCGCTGAAGAAGAGCTCATTGAACTGGGTAAACCTTTTGGTAAAGTTGTTAATACCAAGTGCAATGTCGGTGCCAATAAGAATCAAGCTTTCATTGAATTTGCGGACCTGAATCAAGCTATTGCAATGATATCCTACTACGCTTCATCCTCAGAGCCTGCTCAAATACGGGGAAAAACTGTTTACTTACAGTATTCCAATAGGCAAGAAATTGTAAACAATAAGACTACTGCTGATACTGCAGGAAATGTGCTGTTGGTGACCATTGAGGGCAATGAAGCTCGCCAAGTCAGTATTGATGTTTTACACTTGGTATTTTCAGCGTTTGGTTTTGTGCATAAAATTACAACTTTTGAGAAGACAGCTGGATTTCAGGCGTTGATTCAGTTTTCTGACACAGAGACTGCGTCTAGTGCAAAGAATGCTTTGGATGGAAGAAGCATCCCAAGGTACCTGCTTCCAGAGCATGTAGGGCCATGCACCCTTAGGATTACGTACTCTGCACATACTGATTTGAGTGTCAAATTTCAGAGCCACCGCAGCAGGGATTACACTAATCCATACCTTCCAGTTGCGCCATCGGCCATAGATGCAACCGGTCAGTTAGGTGTGGGTTTGGACGGCAAAAAATTGGAACCCGAGAGCAATGTCCTCTTGGCATCTATTGAAAATATGCAGTATGCTGTAACATTAGATGTCTTGCAAACGGTCTTTTCTTCCTTTGGACTTGTGCAAAAAATTGCCATGTTTGACAAGAATGGAGGAGTGCAGGCGTTGATTCAATACCCTGATGTTCAGACAGCTGTTGTTGCAAAGGAAGCACTGGAGGGACATTGCATATATGATGGAGGGTTTTGCAAACTCCACTTGTCATATTCACGCCACACTGATTTGAGCATCAAGGTAAACAACGACAGAAGCAGAGACTACACCATTCCTAATCCAGCAATCCAACCACCACCAATTCAACCCTCGATTCTTGGACAACAGCCACCGGTACCGATGCCTGGAGCTGCTGCTGCCCCTCCCTACAACGGTGCTCACTATGCAGGGCCGCCTCCATCATCAGCAGGATGGGGACCACCTGCTGGTGGGCCACCTCAGCCCATGCCTATGCAGATGCAAAATTACCCTTACATGCCTCCAGGGGCTGTGCCTCCTGGGCCACCCGGCACTATGCCACCGGGCTCTGCGCCGCCTGAAATGAACCATGGGATGATGCATATGCAGAACCCGGGCAACTTACCACAGCAGCCAGGTGCAATGCCTCCATACAGCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_103930.p1 GENE.S_Transcript_103930~~S_Transcript_103930.p1 ORF type:complete len:456 (+),score=85.28,RRM_5|PF13893.2|0.00016,RRM_5|PF13893.2|0.0007,RRM_5|PF13893.2|1.3e-07,RRM_1|PF00076.18|2.7e-07,RRM_1|PF00076.18|0.0016,RRM_1|PF00076.18|0.00028,RRM_6|PF14259.2|3.7e-06,RRM_6|PF14259.2|0.38,RRM_6|PF14259.2|0.18 S_Transcript_103930:191-1558(+)
MASVSSQPQFRYTQPPSKVLHLRNLPWECAEEELIELGKPFGKVVNTKCNVGANKNQAFIEFADLNQAIAMISYYASSSEPAQIRGKTVYLQYSNRQEIVNNKTTADTAGNVLLVTIEGNEARQVSIDVLHLVFSAFGFVHKITTFEKTAGFQALIQFSDTETASSAKNALDGRSIPRYLLPEHVGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDATGQLGVGLDGKKLEPESNVLLASIENMQYAVTLDVLQTVFSSFGLVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHLSYSRHTDLSIKVNNDRSRDYTIPNPAIQPPPIQPSILGQQPPVPMPGAAAAPPYNGAHYAGPPPSSAGWGPPAGGPPQPMPMQMQNYPYMPPGAVPPGPPGTMPPGSAPPEMNHGMMHMQNPGNLPQQPGAMPPYSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST