Transcript Information: S_Transcript_104018.p1


Annotated TAIR IDAT5G57580.1
Annotated Gene NameCalmodulin-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23314994-23317683 | Reverse length=647
E-Value2E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7298524458397
Replicate 23.5099892477865
Replicate 33.6326601376789
Condition 2: 8 Hour
Replicate 15.7352375474108
Replicate 23.8981251417705
Replicate 32.6644809506227
Condition 3: 24 Hour
Replicate 13.1857121757117
Replicate 22.7471286759209
Replicate 33.0094484801559


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104018.p1 GENE.S_Transcript_104018~~S_Transcript_104018.p1 ORF type:complete len:528 (+),score=111.43,Calmodulin_bind|PF07887.7|7e-73 S_Transcript_104018:775-2358(+)
ATGGCTCATGATCACTTTGACCCTACTGGGCCTTGTTGGTGTAGAGGTTTCAGTGTTACTAACTTGGTAGAAGTTCTCAGACCTTGTATTCGACAAGAGGTTGAAGAGGGATTGAAGCTCCAAGATCAACGCTTTGAAAAGGCATTGAAACGAGTAATATTACCTTATCTGCCCTCATTGCAAAATTCTGGTTTGCCTTCAACCTCAAGATCATTGCCTAATCAGGCTGAGTCACCCGTCTCAACACTGTTGACATTGCATTTTGTGGGCATCTTTCCTGATACACTGTTCACTTACACTGATATAGAAATTGATGGTACTCCACTTCAAGTGGAGTTGCATGATAGTTCTGGGTCCAGGGTAGAAGATGGCCCTATGTCCTCTGCAAAGGTTAAGATTCTTGCCCTATTTGGAGACTTGGAGGAGGATAATGATGTTTGGACTGGGGAGGATTACAACAAAAATTCTGTCAAACAGAGGAAAGACAAAGGGGCATTGTTGGGAGGTGATTATGAAATTCGTATGAGCAAAGGGGTTGCTGTTTTCAGTAACATTCGGTTTACTGATAACTCAAAATGGACGAGAAGTGGCACCTTCAAACTAGGCGTTGTTGTAAAAGGTCTCCCCTCTGGGGTTGTTGTAAAGGGAGCTGTAAGCAAAGCTTTCAAGGTGAAAGAACGTCGCACACTAGCTTGTCGGAAGCACAAGACTCCTTCACTAGAAGATGAAGTGTGGCATTTGGTCAACATAGGGAAAAATGGGAGAACTCATCAGAGTCTGGCAAATGAAAATGTTAAGACTGTGAAGGACTTGCTACAACTATATCGCACCAATCCAAAGAAGCTGAGAAATATTCTTCAAGTTCCGGAGAAGAAATGGACAGATATTGTCAAACATGCTGGATCATGTCTGGGAACGGGAAGCAGCGAGAATTGCATGTACAAGGATGTTAAAGACAACATTGACCTTCTCTTAGATGGTGTTCCTAATGTCATAGGTGGACCATTCAAGGGTCAAATTGGTCAGTCTTATGGAATCCTTGATGATTCCCAGAAGGTTGATACATTGGACCATATTGTTTATGACAAAAGAAGTGTGATGCCAAAAACTGATAGTCTGACCAATCAGAAATCAGGGCAAGCTGAACTCATATACTCATCTACTATTATCCATGCCAATTCTGAGTGCACACCCTTCTGTGCATCTTCTTCTGGACAAGCTCACGCCACAGCTGCAGATCATGGTGAACAACTGTTGCCAGTGAATAGTTCACCAGGTCTTATGCAATACACTGTGGAACAACATGCAGGTATGTACCAACCAGGAGCACCGACATGTGAAATGGCAGATTTCGATCTATTTCCGGGAGAAGATTTTTGGGTCAGCAGCTTCGGAAATGCTGTATTGGCTGACTCAACTCCGCAGCCAGAGGAAAGACATGCTGGATGTGATTCTTCGGCCAATAAAACTGCTACCAGTAAGCTCAGAGTCGCATGTTATGTCAAACTAGCTGCTACAGTGTTCACGATTCCAGTTCAGCAAGATCCTACTGCCCCAAGGAAGAAGCAAAAGATCCAATGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104018.p1 GENE.S_Transcript_104018~~S_Transcript_104018.p1 ORF type:complete len:528 (+),score=111.43,Calmodulin_bind|PF07887.7|7e-73 S_Transcript_104018:775-2358(+)
MAHDHFDPTGPCWCRGFSVTNLVEVLRPCIRQEVEEGLKLQDQRFEKALKRVILPYLPSLQNSGLPSTSRSLPNQAESPVSTLLTLHFVGIFPDTLFTYTDIEIDGTPLQVELHDSSGSRVEDGPMSSAKVKILALFGDLEEDNDVWTGEDYNKNSVKQRKDKGALLGGDYEIRMSKGVAVFSNIRFTDNSKWTRSGTFKLGVVVKGLPSGVVVKGAVSKAFKVKERRTLACRKHKTPSLEDEVWHLVNIGKNGRTHQSLANENVKTVKDLLQLYRTNPKKLRNILQVPEKKWTDIVKHAGSCLGTGSSENCMYKDVKDNIDLLLDGVPNVIGGPFKGQIGQSYGILDDSQKVDTLDHIVYDKRSVMPKTDSLTNQKSGQAELIYSSTIIHANSECTPFCASSSGQAHATAADHGEQLLPVNSSPGLMQYTVEQHAGMYQPGAPTCEMADFDLFPGEDFWVSSFGNAVLADSTPQPEERHAGCDSSANKTATSKLRVACYVKLAATVFTIPVQQDPTAPRKKQKIQC*

Click here to download the sequence:
Link to NCBI Protein BLAST