Transcript Information: S_Transcript_104109.p1


Annotated TAIR IDAT5G01880.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:339017-339496 | Forward length=159
E-Value7.1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0606686433479
Replicate 28.9099727059194
Replicate 38.8667000401926
Condition 2: 8 Hour
Replicate 19.3298582637457
Replicate 27.2063166291427
Replicate 36.251282230307
Condition 3: 24 Hour
Replicate 126.570940015002
Replicate 222.010047780876
Replicate 322.67558799883


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104109.p1 GENE.S_Transcript_104109~~S_Transcript_104109.p1 ORF type:complete len:208 (+),score=25.68,zf-RING_2|PF13639.2|1.8e-16,zf-RING_11|PF17123.1|2.1e-11,zf-RING_11|PF17123.1|7.1e+03,zf-rbx1|PF12678.3|1.4e-07,zf-C3HC4_2|PF13923.2|5.2e-07,zf-C3HC4|PF00097.21|8e-07 S_Transcript_104109:401-1024(+)
ATGGGAGTGTATAGTTATAGCCATAGGCATCTACTAGAAACTTCACCACCAGTGAGTAGTTCTTCTTCTTCTTCGTCTGATGGGGTCACCAACCGTACGGCGGATACAGAGTTTACACAAGCAAATTTCGACACGAACATGATAATAATCCTGGCAGCTCTGCTCTGCGCTTTGATTGTTGCTCTTGGGTTAAACTCAATGGTGCGCTGCGTTTTGAGGTGCGGTAGGAGGCTTGGTATGGAAACCGCTGAGCAAGCTGCTGCTCGTATGTCGGCTACTGGGCTCAAGAAGAGTGCGCTGAGGAAGATTCCTATTTTTGTCTATGGGTCGGATCTCGGGTCGGGCTCGGGTATGGGTATTCATCCTGGGTCGGAGTGCCCCATTTGCTTGGGGGAGTTTATGGATGGGGAGAAGGTTAGAGTGTTGCCTAATTGTAATCATGGGTTCCACGTCAGCTGTATTGACACGTGGCTCGGGTCCCACTCGTCGTGTCCCAATTGCCGCCACTCGTTGGTTGATGCCCCAGCCTCGTCGAAGGCGGTGCCGCCACAGCAACCACCACCTGATGGTGGAGGAGAGGGGGAGCATGTGGTGGTGGTTGAGGTGAGTGAGGGGAGGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104109.p1 GENE.S_Transcript_104109~~S_Transcript_104109.p1 ORF type:complete len:208 (+),score=25.68,zf-RING_2|PF13639.2|1.8e-16,zf-RING_11|PF17123.1|2.1e-11,zf-RING_11|PF17123.1|7.1e+03,zf-rbx1|PF12678.3|1.4e-07,zf-C3HC4_2|PF13923.2|5.2e-07,zf-C3HC4|PF00097.21|8e-07 S_Transcript_104109:401-1024(+)
MGVYSYSHRHLLETSPPVSSSSSSSSDGVTNRTADTEFTQANFDTNMIIILAALLCALIVALGLNSMVRCVLRCGRRLGMETAEQAAARMSATGLKKSALRKIPIFVYGSDLGSGSGMGIHPGSECPICLGEFMDGEKVRVLPNCNHGFHVSCIDTWLGSHSSCPNCRHSLVDAPASSKAVPPQQPPPDGGGEGEHVVVVEVSEGRS*

Click here to download the sequence:
Link to NCBI Protein BLAST