Transcript Information: S_Transcript_104139.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5046432982787
Replicate 211.819351548669
Replicate 39.7153699011824
Condition 2: 8 Hour
Replicate 115.137219019751
Replicate 212.184667562708
Replicate 312.465964447556
Condition 3: 24 Hour
Replicate 110.824919944
Replicate 29.2071734528911
Replicate 39.6834634769642


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104139.p1 GENE.S_Transcript_104139~~S_Transcript_104139.p1 ORF type:complete len:224 (+),score=71.88,Rho_GDI|PF02115.13|2.7e-69 S_Transcript_104139:173-844(+)
ATGGAGGGTGTGAAGAGAGAAGAAGAAGCAGGGAGTTCTTCTGTTGGTGTTCTTGGGGAAAAGAATGAAAACCCAACTGAAAAAGAACAACAACAACAACAACAACAACAAGAAACTGATGATGGGTCTTTTGATAGTAATTATTTTCCTGGCCCTCTTGTTCCTCTCCAACAACACCTTGACAAAGACAAGGATGATGAGAGCTTAAGGAGGTGGAAAGAGAAGCTATTAGGTTCTGTAGAAGGCGATTTAAATGGCCAAGTGGAACCTGAAGTTACATTTCACTCCATTGGAATGATATCGGATGACCTTGGAGAATTCAATACCTCTTTGCCTCTTGATGAGAGCAACAGCAGCAAGATTTTGTTTTCACTCAAAGAGGGGTCTCAGTATCGTCTCAAGCTCTCATTCACTGTCAAGCATAATATTGTGTCTGGTCTGGCCTACTCTAATACCGTGTGGAGAGGTGGAATGCAAGTGGATCAAATGAAAGGAATGTTGGGTACATTTGCTCCTCAACAAGAACCCTACTTCCACCTGTTAGATGAGGAGACAACTCCATCTGGTGCACTAGCAAGGGGAATTTACTTGGCAAAGCTGAGGTTTGAAGATGATGACAAAAAATGTCACTTGGAGCTGAGTTACAGTTTTGAAATTAAAAAGAGGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104139.p1 GENE.S_Transcript_104139~~S_Transcript_104139.p1 ORF type:complete len:224 (+),score=71.88,Rho_GDI|PF02115.13|2.7e-69 S_Transcript_104139:173-844(+)
MEGVKREEEAGSSSVGVLGEKNENPTEKEQQQQQQQQETDDGSFDSNYFPGPLVPLQQHLDKDKDDESLRRWKEKLLGSVEGDLNGQVEPEVTFHSIGMISDDLGEFNTSLPLDESNSSKILFSLKEGSQYRLKLSFTVKHNIVSGLAYSNTVWRGGMQVDQMKGMLGTFAPQQEPYFHLLDEETTPSGALARGIYLAKLRFEDDDKKCHLELSYSFEIKKRS*

Click here to download the sequence:
Link to NCBI Protein BLAST