Transcript Information: S_Transcript_10423.p1


Annotated TAIR IDAT3G45780.1
Annotated Gene Namephototropin 1
Annotated Gene Symbol(s)PHOT1, NPH1, JK224, RPT1
Annotation TypeOrtholog
Chromosome Positionchr3:16818557-16823960 | Forward length=996
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.738972671539
Replicate 298.575556191867
Replicate 3108.31120591111
Condition 2: 8 Hour
Replicate 1165.33143398461
Replicate 2176.58512064663
Replicate 3168.81370661727
Condition 3: 24 Hour
Replicate 192.712974489073
Replicate 287.796332128923
Replicate 387.007072815614


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10423.p1 GENE.S_Transcript_10423~~S_Transcript_10423.p1 ORF type:complete len:983 (+),score=215.11,Pkinase|PF00069.21|3.8e-63,PAS_9|PF13426.2|3.3e-19,PAS_9|PF13426.2|1.6e-17,Pkinase_Tyr|PF07714.13|4.4e+03,Pkinase_Tyr|PF07714.13|9.4e-16,Pkinase_Tyr|PF07714.13|6.3e-09,PAS_3|PF08447.7|9.3e-09,PAS_3|PF08447.7|2.6e-06,PAS_3|PF08447.7|6.5e+03,PAS|PF00989.20|1.6e-07,PAS|PF00989.20|1.6e-06,PAS_4|PF08448.6|0.0074,PAS_4|PF08448.6|0.031,Kinase-like|PF14531.2|1.2e-05 S_Transcript_10423:378-3326(+)
ATGGAATCAGAACGTTCAGGCAAGTCATCCTCACTCATCCCACCATTGCCAAGAGATCCTCGAGGCTCTCTGGAAGTATTCAATCCTTCTACTTACTCTACGAGACCAACCAATCCAGTTTTCCAGTCCCCATCTACATGGAAAAGCTGGACCGAAGCACATGGCAGGCTCGAGCAGGTTCAGGAGGAGGAGCCGAAGCTTCAAAATAAACAGGATTGGGCTAGTTCAGAGGAGATCACCTCATGGATGGCTCTACCCAACCCAGCCTCACCAGTGTCAACAACAATATCTCATGCAAAAGCAGATGATCACCAGAGTAATAAGGATGAGGCAGAGCAGAGGGCAGCAGAATGGGGTCTAGTGCTGAAAACAGATACTGAAACTGGTAAGCCACAAGGTGTGACTGTGCGCACTTCGGGTGGGGATGATAAACCCGAGAACTCGAGGAGGGAGTCCGGTGGGTCAGTTCGGAACTCTGGTGAATCCTCAGATGATGGATTGGCGAGGGGTGTGCCAAAAGTGTCTGAAGACCTGAAGGATGTGTTATCAACATTTCAGCAAACTTTTGTGGTTTCCGATGCTTCCAAACCGGATTATCCGATTCTGTACGCCAGCGAGGGATTCTTTAAGATGACTGGGTACAGCTCCAGAGAGGTTATTGGCAGAAACTGCCGGTTTTTACAGGGAGCAGAAACCGACCCAGAAGAGTTGGAAAAGATCAGAGCAGCTTTACAAAAGGGAAATAATTACTGTGGGAGGTTGGTGAATTATAAGAAAGATGGGACCCCTTTCTGGAATCTTTTAACAATTGCACCCATCAAAGATGAATCAGGAAAGGTTCTCAAATTTATAGGGATGCAAGTGGAAGTGAGCAAGCACACAGAGGGTTTTAAAGATAAGATGATCCGTCCGAATGGGCTACCAGAATCCTTGATTCGTTATGATGCTCGTCAAAAGGACATGGCAACCTCTTCTGTAAATGAGCTAGTGCGGGCAGTTAAAAGACCTCGGGCACTTAGTGAATCAGCTAATCGACCCTTCAGGAGAAAGTCAGGTGTTGCTAATGAGAAAGAAAGAACAGAGTCTCTCATGCGAAGAAAATCAGAAAGTGTTGCTTCAGCTAGGCGTAATTCGTTAGAGCGACTCAGTGAGGTGCCTGAAAAGAAACCTAAAAAATCTGGACGCCGTTCATTGATGGGAATTTTAAAGAAAAGCAAGCCCAGTGAGGCCACTGATGATGAAGTTATCATTGATATTGGAAGTACTGATGAAGAAATTGATTATGACGAAGATGATGATGGAAGGCCTGATAGTGTGGATGACAAAGTGAGGAAGAAGGAAATGAGAAAGGGTATTGATCTTGCTACTACCCTTGAACGTATAGAGAAAAATTTTGTCATCACTGATCCAAGGCTTCCTGACAATCCCATTATATTTGCATCTGATAGCTTTTTGGAATTGACGGAGTACAGTAGGGAAGAGATTTTGGGAAGAAATTGCAGGTTTCTTCAGGGACCTGAAACTGATCCAGAGACAGTGCGCAAAATCAGAGATGCAATCTATAATGAAACAGAAGTCACTGTTCAGTTGATTAACTACACAAAGACTGGAAAAAAATTCTGGAATGTGTTTCATCTCCAGCCTATGCGTGATCAAAAGGGAGAAGTTCAGTACTTTATTGGGGTACAGTTAGATGGTAGTCAACATGTTGAAGCATTGCAAAACAGCATTTCATTTGCTTCTGCTACAGAGAGTGAGGAACAGGTGAAGCAAACGGCAAAAAATGTTGATGTTGCAGTTAGAGAACTTCCAGATGCCAATAAAAAACCAGAGGATTTGTGGGCTAACCATTCTAAGGTTGTACAACCAAAACCCCATAGAAAGGACAGTTCATCATGGAAAGCCATCCAGAAGATTACAGAAAGTGGAGAACAAATAGGTTTGAAACATTTTAAACCAGTGAGGCCTCTCGGGGCTGGTGACACAGGAAGTGTACATTTGGTAGAATTGTGTGGAACAGGAGAATTGTTTGCCATGAAGGCAATGGATAAGAACGCTATGCTAAACCGCAACAAGGTCCATAGAGCTTGTGCTGAAAGGGAAATCCTTGACATGCTTGACCACCCCTTTCTCCCTGCATTGTATGCTTCATTTCAGACAAAAACTCACATTTGCTTGATAACCGACTACTATCCTGGCGGGGAGCTCTTTCTACTTCTGGATAGACAACCGTTCAAGGTTTTGAAGGAAGACGCTGCTAGGTTTTATGCAGCAGAGGTGATTGTTGCACTGGAATATCTACATTGCCAAGGTATAATATACAGGGATCTCAAGCCTGAGAATATATTACTCCAAAGCAACGGCCACATATCGCTGACAGATTTTGATCTATCATGTTTGACATCTTGCAAACCGCAGCTGCTGATTCCAGAGATCCGGGAAAAGAAAAGGCAACAGAAGGGTCAACGAACTCCTATATTTTTGGCTGAACCAATGCGAGCATCAAATTCTTTTGTAGGGACAGAGGAATACATAGCTCCGGAAATTGTCACTGGATCTGGTCACACGAGTGCTGTGGACTGGTGGGCTTTAGGAATTCTCTTGTTTGAGATGATCTATGGATACACACCATTCCGTGGTAAAACAAGGCAAAAAACATTCACCAATATTCTTCGTAAGGATGTTAAATTTCCAGCAAGTAAACAGGTGAGTCTCAGTGTGAAGCAGCTAATATACGAGTTGTTGCAGAAAGACCCCAAGACTAGATTGGGAGCTTGTGAAGGAGCTAATGAAATCAAGCGGCATCCATACTTTCGAGGAATCAATTGGGCTCTTATTCGTTGCATGAAGCCTCCCGAGCTTGATTTGCTGCCTTTCCCTTCCGACCCTGAAAAGGAAGCGAAGATCTTGGACCCTGATATGCTAGACCTGCAAACAAATGTGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10423.p1 GENE.S_Transcript_10423~~S_Transcript_10423.p1 ORF type:complete len:983 (+),score=215.11,Pkinase|PF00069.21|3.8e-63,PAS_9|PF13426.2|3.3e-19,PAS_9|PF13426.2|1.6e-17,Pkinase_Tyr|PF07714.13|4.4e+03,Pkinase_Tyr|PF07714.13|9.4e-16,Pkinase_Tyr|PF07714.13|6.3e-09,PAS_3|PF08447.7|9.3e-09,PAS_3|PF08447.7|2.6e-06,PAS_3|PF08447.7|6.5e+03,PAS|PF00989.20|1.6e-07,PAS|PF00989.20|1.6e-06,PAS_4|PF08448.6|0.0074,PAS_4|PF08448.6|0.031,Kinase-like|PF14531.2|1.2e-05 S_Transcript_10423:378-3326(+)
MESERSGKSSSLIPPLPRDPRGSLEVFNPSTYSTRPTNPVFQSPSTWKSWTEAHGRLEQVQEEEPKLQNKQDWASSEEITSWMALPNPASPVSTTISHAKADDHQSNKDEAEQRAAEWGLVLKTDTETGKPQGVTVRTSGGDDKPENSRRESGGSVRNSGESSDDGLARGVPKVSEDLKDVLSTFQQTFVVSDASKPDYPILYASEGFFKMTGYSSREVIGRNCRFLQGAETDPEELEKIRAALQKGNNYCGRLVNYKKDGTPFWNLLTIAPIKDESGKVLKFIGMQVEVSKHTEGFKDKMIRPNGLPESLIRYDARQKDMATSSVNELVRAVKRPRALSESANRPFRRKSGVANEKERTESLMRRKSESVASARRNSLERLSEVPEKKPKKSGRRSLMGILKKSKPSEATDDEVIIDIGSTDEEIDYDEDDDGRPDSVDDKVRKKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPETVRKIRDAIYNETEVTVQLINYTKTGKKFWNVFHLQPMRDQKGEVQYFIGVQLDGSQHVEALQNSISFASATESEEQVKQTAKNVDVAVRELPDANKKPEDLWANHSKVVQPKPHRKDSSSWKAIQKITESGEQIGLKHFKPVRPLGAGDTGSVHLVELCGTGELFAMKAMDKNAMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHICLITDYYPGGELFLLLDRQPFKVLKEDAARFYAAEVIVALEYLHCQGIIYRDLKPENILLQSNGHISLTDFDLSCLTSCKPQLLIPEIREKKRQQKGQRTPIFLAEPMRASNSFVGTEEYIAPEIVTGSGHTSAVDWWALGILLFEMIYGYTPFRGKTRQKTFTNILRKDVKFPASKQVSLSVKQLIYELLQKDPKTRLGACEGANEIKRHPYFRGINWALIRCMKPPELDLLPFPSDPEKEAKILDPDMLDLQTNVF*

Click here to download the sequence:
Link to NCBI Protein BLAST